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    ZFYVE27 zinc finger FYVE-type containing 27 [ Homo sapiens (human) ]

    Gene ID: 118813, updated on 9-Dec-2024

    Summary

    Official Symbol
    ZFYVE27provided by HGNC
    Official Full Name
    zinc finger FYVE-type containing 27provided by HGNC
    Primary source
    HGNC:HGNC:26559
    See related
    Ensembl:ENSG00000155256 MIM:610243; AllianceGenome:HGNC:26559
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    SPG33; PROTRUDIN
    Summary
    This gene encodes a protein with several transmembrane domains, a Rab11-binding domain and a lipid-binding FYVE finger domain. The encoded protein appears to promote neurite formation. A mutation in this gene has been reported to be associated with hereditary spastic paraplegia, however the pathogenicity of the mutation, which may simply represent a polymorphism, is unclear. [provided by RefSeq, Mar 2010]
    Expression
    Ubiquitous expression in small intestine (RPKM 6.9), duodenum (RPKM 6.9) and 25 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See ZFYVE27 in Genome Data Viewer
    Location:
    10q24.2
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (97737128..97760895)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (98617284..98641047)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (99496885..99520652)

    Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr10:99446822-99448021 Neighboring gene arginine vasopressin induced 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3858 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2685 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:99478816-99479636 Neighboring gene MARVEL domain containing 1 Neighboring gene Sharpr-MPRA regulatory region 11334 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3859 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2686 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2687 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:99519797-99520296 Neighboring gene Sharpr-MPRA regulatory region 10521 Neighboring gene Sharpr-MPRA regulatory region 10024 Neighboring gene secreted frizzled related protein 5 Neighboring gene uncharacterized LOC107984260 Neighboring gene GOLGA7B divergent transcript Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr10:99599631-99600830

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables identical protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in endoplasmic reticulum tubular network formation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in endoplasmic reticulum tubular network formation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in neuron projection development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in neuron projection development IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in neurotrophin TRK receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in neurotrophin TRK receptor signaling pathway ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of axon extension IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of axon extension ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in protein localization to plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein localization to plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in vesicle-mediated transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in vesicle-mediated transport IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in axon ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
     
    located_in dendrite ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in endoplasmic reticulum membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in endoplasmic reticulum tubular network IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum tubular network IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in growth cone membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in growth cone membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in intracellular membrane-bounded organelle IDA
    Inferred from Direct Assay
    more info
     
    located_in nucleoplasm IDA
    Inferred from Direct Assay
    more info
     
    located_in recycling endosome membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    protrudin
    Names
    spastic paraplegia 33 protein
    zinc finger FYVE domain containing 27

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_017075.1 RefSeqGene

      Range
      5008..28775
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001002261.4NP_001002261.1  protrudin isoform 1

      See identical proteins and their annotated locations for NP_001002261.1

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Consensus CDS
      CCDS31262.1
      UniProtKB/Swiss-Prot
      Q5T4F4
      Conserved Domains (1) summary
      cd15723
      Location:354414
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    2. NM_001002262.4NP_001002262.1  protrudin isoform 3

      See identical proteins and their annotated locations for NP_001002262.1

      Status: REVIEWED

      Source sequence(s)
      AK074876, AL358938, AL561314, BC030621, BF063694, DC302372
      Consensus CDS
      CCDS31264.1
      UniProtKB/Swiss-Prot
      Q5T4F4
      Related
      ENSP00000353069.3, ENST00000359980.5
      Conserved Domains (1) summary
      cd15723
      Location:342402
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    3. NM_001174119.2NP_001167590.1  protrudin isoform 4

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Consensus CDS
      CCDS53562.1
      UniProtKB/Swiss-Prot
      Q5T4F4
      Related
      ENSP00000337993.7, ENST00000337540.11
      Conserved Domains (1) summary
      cd15723
      Location:310370
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    4. NM_001174120.2NP_001167591.1  protrudin isoform 5

      See identical proteins and their annotated locations for NP_001167591.1

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Consensus CDS
      CCDS53563.1
      UniProtKB/Swiss-Prot
      Q5T4F4
      Related
      ENSP00000350148.4, ENST00000357540.8
      Conserved Domains (1) summary
      cd15723
      Location:256316
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    5. NM_001174121.2NP_001167592.1  protrudin isoform 6

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Consensus CDS
      CCDS53565.1
      UniProtKB/Swiss-Prot
      Q5T4F4
      Related
      ENSP00000359642.3, ENST00000370610.7
      Conserved Domains (1) summary
      cd15723
      Location:249309
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    6. NM_001174122.2NP_001167593.1  protrudin isoform 7

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Consensus CDS
      CCDS53564.1
      UniProtKB/Swiss-Prot
      Q5T4F4
      Related
      ENSP00000359646.3, ENST00000370613.7
      Conserved Domains (1) summary
      cd15723
      Location:224284
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    7. NM_001385871.1NP_001372800.1  protrudin isoform 1

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Consensus CDS
      CCDS31262.1
      Related
      ENSP00000409594.2, ENST00000423811.3
      Conserved Domains (1) summary
      cd15723
      Location:354414
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    8. NM_001385875.1NP_001372804.1  protrudin isoform 2

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Consensus CDS
      CCDS31263.1
      UniProtKB/Swiss-Prot
      B7Z3S0, B7Z404, B7Z626, G8JLC3, G8JLF0, J3KP98, Q5T4F1, Q5T4F2, Q5T4F3, Q5T4F4, Q8N1K0, Q8N6D6, Q8NCA0, Q8NDE4, Q96M08
      Related
      ENSP00000506975.1, ENST00000684270.1
      Conserved Domains (1) summary
      cd15723
      Location:349409
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    9. NM_001385876.1NP_001372805.1  protrudin isoform 8

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:360420
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    10. NM_001385877.1NP_001372806.1  protrudin isoform 9

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:348408
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    11. NM_001385878.1NP_001372807.1  protrudin isoform 10

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:347407
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    12. NM_001385879.1NP_001372808.1  protrudin isoform 10

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:347407
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    13. NM_001385880.1NP_001372809.1  protrudin isoform 3

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Consensus CDS
      CCDS31264.1
      Conserved Domains (1) summary
      cd15723
      Location:342402
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    14. NM_001385881.1NP_001372810.1  protrudin isoform 15

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:342402
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    15. NM_001385882.1NP_001372811.1  protrudin isoform 11

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:347389
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    16. NM_001385883.1NP_001372812.1  protrudin isoform 12

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:342384
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    17. NM_001385884.1NP_001372813.1  protrudin isoform 12

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:342384
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    18. NM_001385885.1NP_001372814.1  protrudin isoform 13

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:322382
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    19. NM_001385886.1NP_001372815.1  protrudin isoform 14

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:315375
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    20. NM_001385887.1NP_001372816.1  protrudin isoform 16

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:315375
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    21. NM_001385888.1NP_001372817.1  protrudin isoform 16

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:315375
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    22. NM_001385889.1NP_001372818.1  protrudin isoform 17

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:310370
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    23. NM_001385890.1NP_001372819.1  protrudin isoform 18

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:286346
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    24. NM_001385891.1NP_001372820.1  protrudin isoform 18

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:286346
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    25. NM_001385892.1NP_001372821.1  protrudin isoform 19

      Status: REVIEWED

      Source sequence(s)
      AL358938
      UniProtKB/TrEMBL
      A0A0S2Z627
      Conserved Domains (1) summary
      cd15723
      Location:281341
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    26. NM_001385893.1NP_001372822.1  protrudin isoform 20

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:279339
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    27. NM_001385894.1NP_001372823.1  protrudin isoform 20

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:279339
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    28. NM_001385895.1NP_001372824.1  protrudin isoform 20

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:279339
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    29. NM_001385896.1NP_001372825.1  protrudin isoform 21

      Status: REVIEWED

      Source sequence(s)
      AL358938
      UniProtKB/TrEMBL
      A0A0S2Z5V0
      Conserved Domains (1) summary
      cd15723
      Location:274334
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    30. NM_001385897.1NP_001372826.1  protrudin isoform 21

      Status: REVIEWED

      Source sequence(s)
      AL358938
      UniProtKB/TrEMBL
      A0A0S2Z5V0
      Conserved Domains (1) summary
      cd15723
      Location:274334
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    31. NM_001385898.1NP_001372827.1  protrudin isoform 21

      Status: REVIEWED

      Source sequence(s)
      AL358938
      UniProtKB/TrEMBL
      A0A0S2Z5V0
      Conserved Domains (1) summary
      cd15723
      Location:274334
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    32. NM_001385899.1NP_001372828.1  protrudin isoform 22

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:270330
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    33. NM_001385900.1NP_001372829.1  protrudin isoform 22

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:270330
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    34. NM_001385901.1NP_001372830.1  protrudin isoform 23

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:268328
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    35. NM_001385902.1NP_001372831.1  protrudin isoform 23

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:268328
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    36. NM_001385903.1NP_001372832.1  protrudin isoform 24

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:268328
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    37. NM_001385904.1NP_001372833.1  protrudin isoform 24

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:268328
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    38. NM_001385905.1NP_001372834.1  protrudin isoform 25

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:263323
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    39. NM_001385906.1NP_001372835.1  protrudin isoform 26

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:263323
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    40. NM_001385908.1NP_001372837.1  protrudin isoform 26

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:263323
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    41. NM_001385911.1NP_001372840.1  protrudin isoform 27

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:261321
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    42. NM_001385915.1NP_001372844.1  protrudin isoform 6

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Consensus CDS
      CCDS53565.1
      Conserved Domains (1) summary
      cd15723
      Location:249309
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    43. NM_001385916.1NP_001372845.1  protrudin isoform 28

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:231291
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    44. NM_001385918.1NP_001372847.1  protrudin isoform 29

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:231291
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    45. NM_001385919.1NP_001372848.1  protrudin isoform 30

      Status: REVIEWED

      Source sequence(s)
      AL358938
      Conserved Domains (1) summary
      cd15723
      Location:131191
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    46. NM_144588.7NP_653189.3  protrudin isoform 2

      See identical proteins and their annotated locations for NP_653189.3

      Status: REVIEWED

      Source sequence(s)
      AK074876, AL358938, AL561314, BC030621, BF063694, DC302372
      Consensus CDS
      CCDS31263.1
      UniProtKB/Swiss-Prot
      B7Z3S0, B7Z404, B7Z626, G8JLC3, G8JLF0, J3KP98, Q5T4F1, Q5T4F2, Q5T4F3, Q5T4F4, Q8N1K0, Q8N6D6, Q8NCA0, Q8NDE4, Q96M08
      Related
      ENSP00000377282.3, ENST00000393677.8
      Conserved Domains (1) summary
      cd15723
      Location:349409
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins

    RNA

    1. NR_169794.1 RNA Sequence

      Status: REVIEWED

      Source sequence(s)
      AL358938
    2. NR_169795.1 RNA Sequence

      Status: REVIEWED

      Source sequence(s)
      AL358938
    3. NR_169796.1 RNA Sequence

      Status: REVIEWED

      Source sequence(s)
      AL358938
    4. NR_169797.1 RNA Sequence

      Status: REVIEWED

      Source sequence(s)
      AL358938
    5. NR_169798.1 RNA Sequence

      Status: REVIEWED

      Source sequence(s)
      AL358938
    6. NR_169799.1 RNA Sequence

      Status: REVIEWED

      Source sequence(s)
      AL358938
    7. NR_169800.1 RNA Sequence

      Status: REVIEWED

      Source sequence(s)
      AL358938
    8. NR_169801.1 RNA Sequence

      Status: REVIEWED

      Source sequence(s)
      AL358938
    9. NR_169802.1 RNA Sequence

      Status: REVIEWED

      Source sequence(s)
      AL358938
    10. NR_169803.1 RNA Sequence

      Status: REVIEWED

      Source sequence(s)
      AL358938
    11. NR_169804.1 RNA Sequence

      Status: REVIEWED

      Source sequence(s)
      AL358938
    12. NR_169805.1 RNA Sequence

      Status: REVIEWED

      Source sequence(s)
      AL358938
    13. NR_169806.1 RNA Sequence

      Status: REVIEWED

      Source sequence(s)
      AL358938
    14. NR_169808.1 RNA Sequence

      Status: REVIEWED

      Source sequence(s)
      AL358938
    15. NR_169809.1 RNA Sequence

      Status: REVIEWED

      Source sequence(s)
      AL358938
    16. NR_169810.1 RNA Sequence

      Status: REVIEWED

      Source sequence(s)
      AL358938
    17. NR_169811.1 RNA Sequence

      Status: REVIEWED

      Source sequence(s)
      AL358938

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

      Range
      97737128..97760895
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011539252.3XP_011537554.1  protrudin isoform X1

      Conserved Domains (1) summary
      cd15723
      Location:354396
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    2. XM_011539253.3XP_011537555.1  protrudin isoform X2

      Conserved Domains (1) summary
      cd15723
      Location:347389
      FYVE_protrudin; FYVE-related domain found in protrudin and similar proteins
    3. XM_017015646.2XP_016871135.1  protrudin isoform X5

      UniProtKB/TrEMBL
      B7Z6J9
    4. XM_017015644.1XP_016871133.1  protrudin isoform X3

    5. XM_017015645.1XP_016871134.1  protrudin isoform X4

    6. XM_047424567.1XP_047280523.1  protrudin isoform X6

    RNA

    1. XR_945594.3 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060934.1 Alternate T2T-CHM13v2.0

      Range
      98617284..98641047
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054364723.1XP_054220698.1  protrudin isoform X1

    2. XM_054364724.1XP_054220699.1  protrudin isoform X2

    3. XM_054364727.1XP_054220702.1  protrudin isoform X5

    4. XM_054364725.1XP_054220700.1  protrudin isoform X3

    5. XM_054364726.1XP_054220701.1  protrudin isoform X4

    6. XM_054364728.1XP_054220703.1  protrudin isoform X6

    RNA

    1. XR_008488162.1 RNA Sequence