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    Timm8a2 translocase of inner mitochondrial membrane 8A2 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 680794, updated on 27-Nov-2024

    Summary

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    Official Symbol
    Timm8a2provided by RGD
    Official Full Name
    translocase of inner mitochondrial membrane 8A2provided by RGD
    Primary source
    RGD:1588172
    See related
    EnsemblRapid:ENSRNOG00000013835 AllianceGenome:RGD:1588172
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to be involved in protein transport. Predicted to be located in mitochondrial inner membrane. [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Restricted expression toward (RPKM 36.6) See more
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    Genomic context

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    See Timm8a2 in Genome Data Viewer
    Location:
    15q25
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 15 NC_086033.1 (105529725..105537745)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 15 NC_051350.1 (99123374..99131097)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 15 NC_005114.4 (108448351..108456834)

    Chromosome 15 - NC_086033.1Genomic Context describing neighboring genes Neighboring gene UBA domain containing 2 Neighboring gene G protein-coupled receptor 183 Neighboring gene uncharacterized LOC108352982 Neighboring gene uncharacterized LOC134482164 Neighboring gene transmembrane 9 superfamily member 2 Neighboring gene FKBP prolyl isomerase 3, pseudogene 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RGD

    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    involved_in protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    translocase of inner mitochondrial membrane 8A2
    Names
    translocase of inner mitochondrial membrane 8 homolog a2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001109429.1 → NP_001102899.1  translocase of inner mitochondrial membrane 8A2

      See identical proteins and their annotated locations for NP_001102899.1

      Status: PROVISIONAL

      Source sequence(s)
      CH473951
      UniProtKB/TrEMBL
      A6HUL0, D3ZV76
      Related
      ENSRNOP00000018486.3, ENSRNOT00000018486.5
      Conserved Domains (1) summary
      pfam02953
      Location:21 → 81
      zf-Tim10_DDP; Tim10/DDP family zinc finger

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086033.1 Reference GRCr8

      Range
      105529725..105537745
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063274628.1 → XP_063130698.1  translocase of inner mitochondrial membrane 8A2 isoform X1

      UniProtKB/TrEMBL
      A6HUL0, D3ZV76

    2. XM_063274627.1 → XP_063130697.1  translocase of inner mitochondrial membrane 8A2 isoform X1

      UniProtKB/TrEMBL
      A6HUL0, D3ZV76
    Nucleotide Protein Strain
    Heading Accession and Version

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