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    CG7099 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34753, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG7099provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0032517
    Locus tag
    Dmel_CG7099
    See related
    AllianceGenome:FB:FBgn0032517
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG7099; dTFIIIC; dTFIIIC220; FBgn 32517
    Summary
    Predicted to enable DNA binding activity. Predicted to be involved in 5S class rRNA transcription by RNA polymerase III and transcription initiation at RNA polymerase III promoter. Predicted to be part of transcription factor TFIIIC complex. Is expressed in spermatozoon. Orthologous to human GTF3C1 (general transcription factor IIIC subunit 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG7099 in Genome Data Viewer
    Location:
    34B9-34B10; 2-48 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (13387571..13393959)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (13387571..13393959)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene loquacious Neighboring gene antisense RNA:CR44599 Neighboring gene Inhibitor of growth family member 5 Neighboring gene Ribosomal protein L24 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of a Drosophila amplicon in follicle cells highlights the diversity of metazoan replication origins. Kim JC, et al. Proc Natl Acad Sci U S A, 2011 Oct 4. PMID 21933960, Free PMC Article
    2. Insulator function and topological domain border strength scale with architectural protein occupancy. Van Bortle K, et al. Genome Biol, 2014 Jun 30. PMID 24981874, Free PMC Article
    3. TAD-free analysis of architectural proteins and insulators. Mourad R, et al. Nucleic Acids Res, 2018 Mar 16. PMID 29272504, Free PMC Article
    4. Some novel intron positions in conserved Drosophila genes are caused by intron sliding or tandem duplication. Lehmann J, et al. BMC Evol Biol, 2010 May 26. PMID 20500887, Free PMC Article
    5. The Wright stuff: reimagining path analysis reveals novel components of the sex determination hierarchy in Drosophila melanogaster. Fear JM, et al. BMC Syst Biol, 2015 Sep 4. PMID 26335107, Free PMC Article

    See all (32) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in 5S class rRNA transcription by RNA polymerase III IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in transcription initiation at RNA polymerase III promoter IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in transcription initiation at RNA polymerase III promoter IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of transcription factor TFIIIC complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of transcription factor TFIIIC complex IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG7099-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      13387571..13393959
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135804.3 → NP_609648.1  uncharacterized protein Dmel_CG7099 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609648.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VJY7
      Related
      FBpp0080077
      Conserved Domains (1) summary
      pfam04182
      Location:173 → 249
      B-block_TFIIIC; B-block binding subunit of TFIIIC
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q960L1 Q960L1
    Q9VJY7 Q9VJY7

    Gene LinkOut

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