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    lncRNA:CR30055 long non-coding RNA:CR30055 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 10178803, updated on 17-Dec-2024

    Summary

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    Official Symbol
    lncRNA:CR30055provided by FlyBase
    Official Full Name
    long non-coding RNA:CR30055provided by FlyBase
    Primary source
    FLYBASE:FBgn0050055
    Locus tag
    Dmel_CR30055
    See related
    AllianceGenome:FB:FBgn0050055
    Gene type
    ncRNA
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:GM14547; CG30055; CR30055; Dmel\CR30055
    Old locus tag
    Dmel_CG30055
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    Genomic context

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    See lncRNA:CR30055 in Genome Data Viewer
    Location:
    49B7-49B7; 2-67 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (12589239..12591395)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (8476744..8478900)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene stand still Neighboring gene Chloride channel-b Neighboring gene Sin3A Neighboring gene long non-coding RNA:CR45279 Neighboring gene long non-coding RNA:CR43909 Neighboring gene Amphiphysin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Robust and heritable knockdown of gene expression using a self-cleaving ribozyme in Drosophila. Nyberg KG, et al. Genetics, 2024 Aug 7. PMID 38701221,
    2. Extensive translation of small Open Reading Frames revealed by Poly-Ribo-Seq. Aspden JL, et al. Elife, 2014 Aug 21. PMID 25144939, Free PMC Article
    3. The exon junction complex differentially marks spliced junctions. Saulière J, et al. Nat Struct Mol Biol, 2010 Oct. PMID 20818392
    4. Identification of Genes Involved in the Differentiation of R7y and R7p Photoreceptor Cells in Drosophila. Earl JB, et al. G3 (Bethesda), 2020 Nov 5. PMID 32972998, Free PMC Article
    5. Diverse and pervasive subcellular distributions for both coding and long noncoding RNAs. Wilk R, et al. Genes Dev, 2016 Mar 1. PMID 26944682, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    • lncRNA:CR30055-RB; Dmel\lncRNA:CR30055-RB; CR30055-RB; Dmel\CR30055-RB
    • lncRNA:CR30055-RC; Dmel\lncRNA:CR30055-RC; CR30055-RC; Dmel\CR30055-RC
    • lncRNA:CR30055-RD; Dmel\lncRNA:CR30055-RD; CR30055-RD; Dmel\CR30055-RD

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      12589239..12591395
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_037739.2 RNA Sequence

      Status: REVIEWED

    2. NR_037740.2 RNA Sequence

      Status: REVIEWED

    3. NR_124526.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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