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    CG5447 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43192, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG5447provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039427
    Locus tag
    Dmel_CG5447
    See related
    AllianceGenome:FB:FBgn0039427
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG5447
    Summary
    Predicted to be involved in Golgi to plasma membrane protein transport and protein targeting to membrane. Predicted to be located in Golgi membrane. Predicted to be part of palmitoyltransferase complex. Is expressed in adult head and organism. Orthologous to human GOLGA7 (golgin A7) and GOLGA7B (golgin A7 family member B). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG5447 in Genome Data Viewer
    Location:
    97B3-97B3; 3-91 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (26452534..26454585)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (22278256..22280307)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Hexokinase testis 1 Neighboring gene Hexokinase testis 2 Neighboring gene uncharacterized protein Neighboring gene Pigment-dispersing factor

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Spatial regulation of cell adhesion in the Drosophila wing is mediated by Delilah, a potent activator of βPS integrin expression. Egoz-Matia N, et al. Dev Biol, 2011 Mar 1. PMID 21215259
    2. Drosophila glia: Few cell types and many conserved functions. Yildirim K, et al. Glia, 2019 Jan. PMID 30443934
    3. A comprehensive Drosophila resource to identify key functional interactions between SARS-CoV-2 factors and host proteins. Guichard A, et al. Cell Rep, 2023 Aug 29. PMID 37480566, Free PMC Article
    4. Ribosome profiling reveals pervasive and regulated stop codon readthrough in Drosophila melanogaster. Dunn JG, et al. Elife, 2013 Dec 3. PMID 24302569, Free PMC Article
    5. Latitudinal clines in gene expression and cis-regulatory element variation in Drosophila melanogaster. Juneja P, et al. BMC Genomics, 2016 Nov 28. PMID 27894253, Free PMC Article

    See all (28) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in Golgi to plasma membrane protein transport ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    involved_in protein targeting to membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    part_of palmitoyltransferase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG5447-PA
    CG5447-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      26452534..26454585
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143221.4 → NP_651478.1  uncharacterized protein Dmel_CG5447, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651478.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VBF0
      Related
      FBpp0084384
      Conserved Domains (1) summary
      pfam10256
      Location:29 → 141
      Erf4; Golgin subfamily A member 7/ERF4 family

    2. NM_001276057.1 → NP_001262986.1  uncharacterized protein Dmel_CG5447, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262986.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4KH14
      Conserved Domains (1) summary
      pfam10256
      Location:29 → 141
      Erf4; Golgin subfamily A member 7/ERF4 family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4KH14 A0A0B4KH14
    Q9VBF0 Q9VBF0

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