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    CG12594 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41416, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG12594provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0037941
    Locus tag
    Dmel_CG12594
    See related
    AllianceGenome:FB:FBgn0037941
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG12594
    Orthologs
    all
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    Genomic context

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    See CG12594 in Genome Data Viewer
    Location:
    86E16-86E17; 3-51 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (11721734..11732479)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (7547456..7558201)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene inhibitor-t Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Bloom syndrome helicase Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Landscape of the DNA Transposons in the Genome of the Horezu_LaPeri Strain of Drosophila melanogaster. Bologa AM, et al. Insects, 2023 May 25. PMID 37367310, Free PMC Article
    2. The genetic basis for variation in olfactory behavior in Drosophila melanogaster. Arya GH, et al. Chem Senses, 2015 May. PMID 25687947, Free PMC Article
    3. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article
    4. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article
    5. Systematic genetic analysis of muscle morphogenesis and function in Drosophila. Schnorrer F, et al. Nature, 2010 Mar 11. PMID 20220848

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG12594-PA
    CG12594-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      11721734..11732479
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001275553.1 → NP_001262482.1  uncharacterized protein Dmel_CG12594, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262482.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4V500, Q9VGJ0
      Conserved Domains (2) summary
      smart00209
      Location:239 → 271
      TSP1; Thrombospondin type 1 repeats
      cl22861
      Location:535 → 655
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

    2. NM_141852.3 → NP_650109.1  uncharacterized protein Dmel_CG12594, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650109.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4V500, Q9VGJ0
      Related
      FBpp0081905
      Conserved Domains (2) summary
      smart00209
      Location:239 → 271
      TSP1; Thrombospondin type 1 repeats
      cl22861
      Location:535 → 655
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VGJ0 Q9VGJ0

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