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    cyb5b cytochrome b5 type B [ Danio rerio (zebrafish) ]

    Gene ID: 405812, updated on 4-Jan-2025

    Summary

    Official Symbol
    cyb5bprovided by ZNC
    Official Full Name
    cytochrome b5 type Bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-2614
    See related
    Ensembl:ENSDARG00000099774 AllianceGenome:ZFIN:ZDB-GENE-040426-2614
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:76963
    Summary
    Enables heme binding activity and oxidoreductase activity. Predicted to be active in intracellular membrane-bounded organelle and membrane. Orthologous to human CYB5B (cytochrome b5 type B). [provided by Alliance of Genome Resources, Jan 2025]
    Orthologs
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    Genomic context

    See cyb5b in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (67733784..67744619)
    105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (67510432..67521267)

    Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene zgc:162592 Neighboring gene uncharacterized LOC108190732 Neighboring gene DEAH (Asp-Glu-Ala-His) box polypeptide 38 Neighboring gene polyamine modulated factor 1 binding protein 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Clone Names

    • MGC76963

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables heme binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables heme binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables oxidoreductase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in intracellular membrane-bounded organelle IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_212876.1NP_998041.1  cytochrome b5 type B

      See identical proteins and their annotated locations for NP_998041.1

      Status: PROVISIONAL

      Source sequence(s)
      BC066748
      UniProtKB/TrEMBL
      A0A8M1PIK8, Q6NY41
      Related
      ENSDARP00000138902.1, ENSDART00000172015.2
      Conserved Domains (1) summary
      pfam00173
      Location:29102
      Cyt-b5; Cytochrome b5-like Heme/Steroid binding domain

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007118.7 Reference GRCz11 Primary Assembly

      Range
      67733784..67744619
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)