U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Paqr7 progestin and adipoQ receptor family member 7 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 313615, updated on 3-Dec-2024

    Summary

    Official Symbol
    Paqr7provided by RGD
    Official Full Name
    progestin and adipoQ receptor family member 7provided by RGD
    Primary source
    RGD:1563621
    See related
    EnsemblRapid:ENSRNOG00000022054 AllianceGenome:RGD:1563621
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable nuclear steroid receptor activity and steroid binding activity. Predicted to be involved in response to steroid hormone. Predicted to be active in plasma membrane. Orthologous to human PAQR7 (progestin and adipoQ receptor family member 7). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Kidney (RPKM 349.8), Liver (RPKM 245.4) and 8 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Paqr7 in Genome Data Viewer
    Location:
    5q36
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (151992849..152004267)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (146709159..146720577)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (152708782..152720230)

    Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134487004 Neighboring gene stathmin 1 Neighboring gene uncharacterized LOC102546455 Neighboring gene aurora kinase A and ninein interacting protein Neighboring gene mitochondrial fission regulator 1-like

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables nuclear steroid receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables steroid binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in oogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to steroid hormone IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in steroid hormone receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    membrane progestin receptor alpha
    Names
    progestin and adipoQ receptor family member VII

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001415929.1NP_001402858.1  membrane progestin receptor alpha

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000005
      UniProtKB/TrEMBL
      A0A8I6ASL5, A6IT27, Q4PU88
      Related
      ENSRNOP00000088197.1, ENSRNOT00000109336.2

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086023.1 Reference GRCr8

      Range
      151992849..152004267
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039110043.2XP_038965971.1  membrane progestin receptor alpha isoform X2

      UniProtKB/TrEMBL
      Q4PU88
      Related
      ENSRNOP00000022714.3, ENSRNOT00000022713.5
      Conserved Domains (1) summary
      pfam03006
      Location:75299
      HlyIII; Haemolysin-III related
    2. XM_039110042.2XP_038965970.2  membrane progestin receptor alpha isoform X1

      UniProtKB/TrEMBL
      G3V867, Q4PU88