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    Exoc7 exocyst complex component 7 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 64632, updated on 9-Dec-2024

    Summary

    Symbol
    Exoc7provided by RGD
    Full Name
    exocyst complex component 7provided by RGD
    Primary source
    RGD:620236
    See related
    EnsemblRapid:ENSRNOG00000070201 AllianceGenome:RGD:620236
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Exo70
    Summary
    Predicted to enable protein-macromolecule adaptor activity. Involved in regulation of synapse assembly. Is active in postsynapse and presynapse. Orthologous to human EXOC7 (exocyst complex component 7). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Adrenal (RPKM 137.7), Kidney (RPKM 137.5) and 9 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Exoc7 in Genome Data Viewer
    Location:
    10q32.1
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (102019805..102039333, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (101521630..101540425, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (105242152..105259795, complement)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120095213 Neighboring gene signal recognition particle 68 Neighboring gene galanin receptor 2 Neighboring gene putative protein CRIPAK Neighboring gene uncharacterized LOC108352160 Neighboring gene forkhead box J1 Neighboring gene ring finger protein 157

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables phosphatidylinositol-4,5-bisphosphate binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein-macromolecule adaptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein-macromolecule adaptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in exocytosis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in exocytosis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in exocytosis TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in positive regulation of mitotic cytokinetic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of mitotic cytokinetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in protein transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within protein transmembrane transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in protein transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of entry of bacterium into host cell IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of entry of bacterium into host cell ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of synapse assembly IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in regulation of synapse assembly IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in Flemming body IEA
    Inferred from Electronic Annotation
    more info
     
    located_in centriolar satellite IEA
    Inferred from Electronic Annotation
    more info
     
    located_in centriolar satellite ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
     
    part_of exocyst IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of exocyst IEA
    Inferred from Electronic Annotation
    more info
     
    located_in growth cone membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in growth cone membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in microtubule organizing center ISO
    Inferred from Sequence Orthology
    more info
     
    located_in midbody IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in midbody ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in postsynapse IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in presynapse IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    exocyst complex component 7
    Names
    exocyst complex component Exo70
    rexo70

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_022691.2NP_073182.1  exocyst complex component 7

      See identical proteins and their annotated locations for NP_073182.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000010
      UniProtKB/Swiss-Prot
      O54922
      UniProtKB/TrEMBL
      A0A8L2QUP1, A6HKV6
      Conserved Domains (1) summary
      pfam03081
      Location:288647
      Exo70; Exo70 exocyst complex subunit

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      102019805..102039333 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063269822.1XP_063125892.1  exocyst complex component 7 isoform X3

      UniProtKB/TrEMBL
      A0A8L2QUP1
      Related
      ENSRNOP00000089603.1, ENSRNOT00000108972.2
    2. XM_063269821.1XP_063125891.1  exocyst complex component 7 isoform X2

      UniProtKB/TrEMBL
      A0A8L2QUP1
      Related
      ENSRNOP00000096110.2, ENSRNOT00000094569.2
    3. XM_063269820.1XP_063125890.1  exocyst complex component 7 isoform X1

      UniProtKB/TrEMBL
      A0A8I5ZMD7, A0A8L2QUP1, A6HKV7
      Related
      ENSRNOP00000079219.2, ENSRNOT00000106037.2
    4. XM_063269823.1XP_063125893.1  exocyst complex component 7 isoform X4

      UniProtKB/TrEMBL
      A0A8L2QUP1