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    pdt1 Nramp family Mn(2+) transporter [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2542283, updated on 18-Sep-2024

    Summary

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    Official Symbol
    pdt1
    Official Full Name
    Nramp family Mn(2+) transporter
    Primary source
    PomBase:SPAC27F1.08
    Locus tag
    SPOM_SPAC27F1.08
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See pdt1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (4330960..4333166)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene FKBP-type peptidyl-prolyl cis-trans isomerase Neighboring gene ncRNA Neighboring gene dolichyl-diphosphooligosaccharide--protein glycosyltransferase Ost1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene U2 snRNP-associated protein SF3B1 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pmr1, a P-type ATPase, and Pdt1, an Nramp homologue, cooperatively regulate cell morphogenesis in fission yeast: the importance of Mn2+ homeostasis. Maeda T, et al. Genes Cells, 2004 Jan. PMID 14723709
    2. Coordinated Roles of the Putative Ceramide-Conjugation Protein, Cwh43, and a Mn(2+)-Transporting, P-Type ATPase, Pmr1, in Fission Yeast. Nakazawa N, et al. G3 (Bethesda), 2019 Aug 8. PMID 31201205, Free PMC Article
    3. Genetic interactions and functional analyses of the fission yeast gsk3 and amk2 single and double mutants defective in TORC1-dependent processes. Rallis C, et al. Sci Rep, 2017 Mar 10. PMID 28281664, Free PMC Article
    4. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
    5. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables cadmium ion transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables manganese ion transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in intracellular manganese ion homeostasis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in intracellular manganese ion homeostasis IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in iron ion transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in manganese ion transmembrane transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in manganese ion transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Nramp family Mn(2+) transporter

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      4330960..4333166
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001019966.3 → NP_594537.1  Nramp family Mn(2+) transporter [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_594537.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q10177
      Conserved Domains (2) summary
      TIGR01197
      Location:69 → 466
      nramp; NRAMP (natural resistance-associated macrophage protein) metal ion transporters
      pfam01566
      Location:93 → 466
      Nramp; Natural resistance-associated macrophage protein
    Nucleotide Protein
    Heading Accession and Version

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