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    mde6 muskelin [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2542769, updated on 18-Sep-2024

    Summary

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    Official Symbol
    mde6
    Official Full Name
    muskelin
    Primary source
    PomBase:SPAC15A10.10
    Locus tag
    SPOM_SPAC15A10.10
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See mde6 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    6
    Sequence:
    Chromosome: I; NC_003424.3 (3696565..3700027)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene alpha-actinin Neighboring gene ncRNA Neighboring gene SUR7 family protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene tRNA-Cys Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Yeast SREBP cleavage activation requires the Golgi Dsc E3 ligase complex. Stewart EV, et al. Mol Cell, 2011 Apr 22. PMID 21504829, Free PMC Article
    2. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
    3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
    5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm HDA PubMed 
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    muskelin

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      3696565..3700027
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001019720.4 → NP_594297.2  muskelin [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_594297.2

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O13730
      Conserved Domains (4) summary
      sd00038
      Location:263 → 308
      Kelch; KELCH repeat [structural motif]
      pfam01344
      Location:262 → 302
      Kelch_1; Kelch motif
      pfam06588
      Location:2 → 206
      Muskelin_N; Muskelin N-terminus
      pfam07646
      Location:314 → 367
      Kelch_2; Kelch motif
    Nucleotide Protein
    Heading Accession and Version

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