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    rvb1 chaperone, AAA family ATPase Rvb1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2543227, updated on 18-Sep-2024

    Summary

    Official Symbol
    rvb1
    Official Full Name
    chaperone, AAA family ATPase Rvb1
    Primary source
    PomBase:SPAPB8E5.09
    Locus tag
    SPOM_SPAPB8E5.09
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

    See rvb1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    2
    Sequence:
    Chromosome: I; NC_003424.3 (4924247..4926065)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ribosome biogenesis protein Rrp12 Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene uracil phosphoribosyltransferase Neighboring gene protein Min8 Neighboring gene Elf1 family transcription elongation factor

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables ATP hydrolysis activity NAS
    Non-traceable Author Statement
    more info
     
    enables ATP-dependent chromatin remodeler activity NAS
    Non-traceable Author Statement
    more info
     
    enables DNA helicase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in box C/D snoRNP assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in chromatin remodeling IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    part_of Ino80 complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of Ino80 complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of Ino80 complex IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    part_of NuA4 histone acetyltransferase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of R2TP complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of Swr1 complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of Swr1 complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

    Preferred Names
    chaperone, AAA family ATPase Rvb1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      4924247..4926065
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001020211.3NP_594783.1  chaperone, AAA family ATPase Rvb1 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_594783.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9C0X6
      Conserved Domains (2) summary
      cd00009
      Location:41131
      AAA; The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, ...
      COG1224
      Location:1456
      TIP49; DNA helicase TIP49, TBP-interacting protein [Transcription]