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    SLO1 Slo1p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 856928, updated on 4-Jan-2025

    Summary

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    Official Symbol
    SLO1
    Official Full Name
    Slo1p
    Primary source
    SGD:S000028437
    Locus tag
    YER180C-A
    See related
    AllianceGenome:SGD:S000028437; FungiDB:YER180C-A; VEuPathDB:YER180C-A
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Involved in intracellular protein transport. [provided by Alliance of Genome Resources, Jan 2025]
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    Genomic context

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    See SLO1 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    1
    Sequence:
    Chromosome: V; NC_001137.3 (550865..551122, complement)

    Chromosome V - NC_001137.3Genomic Context describing neighboring genes Neighboring gene recombinase DMC1 Neighboring gene Isc10p Neighboring gene tRNA-Ile Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001137.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The ARF-like GTPases Arl1p and Arl3p act in a pathway that interacts with vesicle-tethering factors at the Golgi apparatus. Panic B, et al. Curr Biol, 2003 Mar 4. PMID 12620189
    2. Utilising established SDL-screening methods as a tool for the functional genomic characterisation of model and non-model organisms. Usher J, et al. FEMS Yeast Res, 2015 Dec. PMID 26472754
    3. The nucleotide sequence of Saccharomyces cerevisiae chromosome V. Dietrich FS, et al. Nature, 1997 May 29. PMID 9169868, Free PMC Article
    4. A conserved quality-control pathway that mediates degradation of unassembled ribosomal proteins. Sung MK, et al. Elife, 2016 Aug 23. PMID 27552055, Free PMC Article
    5. Global analysis of genetic circuitry and adaptive mechanisms enabling resistance to the azole antifungal drugs. Mount HO, et al. PLoS Genet, 2018 Apr. PMID 29702647, Free PMC Article

    See all (15) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in intracellular protein transport IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Slo1p
    NP_796378.3
    • Protein interacting with Arl3p; Arl3p is a GTPase of the Ras superfamily involved in vesicle-tethering at the Golgi; putative ortholog of human SCOCO

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001137.3 Reference assembly

      Range
      550865..551122 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001184517.3 → NP_796378.3  TPA: Slo1p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_796378.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D3DM90, Q3E784
      UniProtKB/TrEMBL
      A6ZRD8, B3LRU1, C7GS28, C8Z7K5, N1P3Q5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3E784.1

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