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    RCBTB2 RCC1 and BTB domain containing protein 2 [ Bos taurus (domestic cattle) ]

    Gene ID: 513632, updated on 30-Jan-2025

    Summary

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    Official Symbol
    RCBTB2provided by VGNC
    Official Full Name
    RCC1 and BTB domain containing protein 2provided by VGNC
    Primary source
    VGNC:VGNC:33824
    See related
    BGD:BT19493; EnsemblRapid:ENSBTAG00070026261
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See RCBTB2 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 12 NC_037339.1 (18241676..18284192, complement)

    Chromosome 12 - NC_037339.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112449037 Neighboring gene RB transcriptional corepressor 1 Neighboring gene lysophosphatidic acid receptor 6 Neighboring gene cysteinyl leukotriene receptor 2 Neighboring gene uncharacterized LOC101903925 Neighboring gene uncharacterized LOC112449038

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037339.1 Chromosome 12 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RCC1 and BTB domain-containing protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001192991.1 → NP_001179920.1  RCC1 and BTB domain-containing protein 2

      See identical proteins and their annotated locations for NP_001179920.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000012
      UniProtKB/TrEMBL
      F1MCW5
      Related
      ENSBTAP00070035250.1, ENSBTAT00070059440.1
      Conserved Domains (3) summary
      smart00225
      Location:371 → 463
      BTB; Broad-Complex, Tramtrack and Bric a brac
      cd14821
      Location:463 → 521
      SPOP_C_like; BACK-like Domain C-terminal to BTB in speckle-type POZ protein (SPOP) and similar proteins
      cl27697
      Location:15 → 316
      RCC1; Regulator of chromosome condensation (RCC1) repeat

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037339.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      18241676..18284192 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010810700.4 → XP_010809002.1  RCC1 and BTB domain-containing protein 2 isoform X7

      See identical proteins and their annotated locations for XP_010809002.1

      UniProtKB/TrEMBL
      F1MCW5
      Conserved Domains (3) summary
      smart00225
      Location:371 → 463
      BTB; Broad-Complex, Tramtrack and Bric a brac
      cd14821
      Location:463 → 521
      SPOP_C_like; BACK-like Domain C-terminal to BTB in speckle-type POZ protein (SPOP) and similar proteins
      cl27697
      Location:15 → 316
      RCC1; Regulator of chromosome condensation (RCC1) repeat

    2. XM_005213626.5 → XP_005213683.1  RCC1 and BTB domain-containing protein 2 isoform X7

      See identical proteins and their annotated locations for XP_005213683.1

      UniProtKB/TrEMBL
      F1MCW5
      Conserved Domains (3) summary
      smart00225
      Location:371 → 463
      BTB; Broad-Complex, Tramtrack and Bric a brac
      cd14821
      Location:463 → 521
      SPOP_C_like; BACK-like Domain C-terminal to BTB in speckle-type POZ protein (SPOP) and similar proteins
      cl27697
      Location:15 → 316
      RCC1; Regulator of chromosome condensation (RCC1) repeat

    3. XM_005213623.5 → XP_005213680.1  RCC1 and BTB domain-containing protein 2 isoform X6

      See identical proteins and their annotated locations for XP_005213680.1

      UniProtKB/TrEMBL
      A0AAA9SU17
      Related
      ENSBTAP00070035263.1, ENSBTAT00070059457.1
      Conserved Domains (3) summary
      smart00225
      Location:398 → 490
      BTB; Broad-Complex, Tramtrack and Bric a brac
      cd14821
      Location:490 → 548
      SPOP_C_like; BACK-like Domain C-terminal to BTB in speckle-type POZ protein (SPOP) and similar proteins
      cl27697
      Location:42 → 343
      RCC1; Regulator of chromosome condensation (RCC1) repeat

    4. XM_005213621.5 → XP_005213678.1  RCC1 and BTB domain-containing protein 2 isoform X5

      See identical proteins and their annotated locations for XP_005213678.1

      UniProtKB/TrEMBL
      A0AAA9S5V5
      Related
      ENSBTAP00070035259.1, ENSBTAT00070059452.1
      Conserved Domains (3) summary
      smart00225
      Location:419 → 511
      BTB; Broad-Complex, Tramtrack and Bric a brac
      cd14821
      Location:511 → 569
      SPOP_C_like; BACK-like Domain C-terminal to BTB in speckle-type POZ protein (SPOP) and similar proteins
      cl27697
      Location:63 → 364
      RCC1; Regulator of chromosome condensation (RCC1) repeat

    5. XM_059892027.1 → XP_059748010.1  RCC1 and BTB domain-containing protein 2 isoform X6

      UniProtKB/TrEMBL
      A0AAA9SU17

    6. XM_005213620.5 → XP_005213677.1  RCC1 and BTB domain-containing protein 2 isoform X5

      See identical proteins and their annotated locations for XP_005213677.1

      UniProtKB/TrEMBL
      A0AAA9S5V5
      Conserved Domains (3) summary
      smart00225
      Location:419 → 511
      BTB; Broad-Complex, Tramtrack and Bric a brac
      cd14821
      Location:511 → 569
      SPOP_C_like; BACK-like Domain C-terminal to BTB in speckle-type POZ protein (SPOP) and similar proteins
      cl27697
      Location:63 → 364
      RCC1; Regulator of chromosome condensation (RCC1) repeat

    7. XM_059892028.1 → XP_059748011.1  RCC1 and BTB domain-containing protein 2 isoform X6

      UniProtKB/TrEMBL
      A0AAA9SU17

    8. XM_005213619.5 → XP_005213676.3  RCC1 and BTB domain-containing protein 2 isoform X3

      UniProtKB/TrEMBL
      A0A3Q1LT46, A0AAA9SU17
      Related
      ENSBTAP00070035307.1, ENSBTAT00070059509.1

    9. XM_005213618.5 → XP_005213675.3  RCC1 and BTB domain-containing protein 2 isoform X2

      UniProtKB/TrEMBL
      A0AAA9RWP3, A0AAA9S503
      Related
      ENSBTAP00070035298.1, ENSBTAT00070059500.1

    10. XM_005213617.5 → XP_005213674.3  RCC1 and BTB domain-containing protein 2 isoform X1

      UniProtKB/TrEMBL
      A0AAA9S503, A0AAA9SNQ1
      Related
      ENSBTAP00070035293.1, ENSBTAT00070059493.1

    11. XM_010810699.4 → XP_010809001.3  RCC1 and BTB domain-containing protein 2 isoform X4

      UniProtKB/TrEMBL
      A0AAA9S503, A0AAA9T079
      Related
      ENSBTAP00070035273.1, ENSBTAT00070059469.1

    12. XM_024999856.2 → XP_024855624.1  RCC1 and BTB domain-containing protein 2 isoform X7

      UniProtKB/TrEMBL
      F1MCW5
      Conserved Domains (3) summary
      smart00225
      Location:371 → 463
      BTB; Broad-Complex, Tramtrack and Bric a brac
      cd14821
      Location:463 → 521
      SPOP_C_like; BACK-like Domain C-terminal to BTB in speckle-type POZ protein (SPOP) and similar proteins
      cl27697
      Location:15 → 316
      RCC1; Regulator of chromosome condensation (RCC1) repeat
    Nucleotide Protein Strain
    Heading Accession and Version

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