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    FAM50A family with sequence similarity 50 member A [ Bos taurus (domestic cattle) ]

    Gene ID: 515539, updated on 30-Jan-2025

    Summary

    Official Symbol
    FAM50Aprovided by VGNC
    Official Full Name
    family with sequence similarity 50 member Aprovided by VGNC
    Primary source
    VGNC:VGNC:28820
    See related
    EnsemblRapid:ENSBTAG00070036050
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
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    Genomic context

    See FAM50A in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) X NC_037357.1 (37504050..37509805)

    Chromosome X - NC_037357.1Genomic Context describing neighboring genes Neighboring gene ATPase H+ transporting accessory protein 1 Neighboring gene GDP dissociation inhibitor 1 Neighboring gene plexin A3 Neighboring gene L antigen family member 3

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037357.1 Chromosome X Reference ARS-UCD2.0 Primary Assembly

    Expression

    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    General gene information

    Markers

    Clone Names

    • MGC128215

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in chromatin organization IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    protein FAM50A
    Names
    XAP-5 protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001034496.2NP_001029668.2  protein FAM50A

      See identical proteins and their annotated locations for NP_001029668.2

      Status: VALIDATED

      Source sequence(s)
      CO887857, DV888640, EE364565
      UniProtKB/TrEMBL
      E1BDX9
      Related
      ENSBTAP00070048965.1, ENSBTAT00070080812.1
      Conserved Domains (1) summary
      pfam04921
      Location:151338
      XAP5; XAP5, circadian clock regulator

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037357.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      37504050..37509805
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)