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    CDV3 CDV3 homolog [ Bos taurus (domestic cattle) ]

    Gene ID: 504871, updated on 30-Jan-2025

    Summary

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    Gene symbol
    CDV3
    Gene description
    CDV3 homolog
    See related
    BGD:BT13940; EnsemblRapid:ENSBTAG00070034581
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See CDV3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 1 NC_037328.1 (135867529..135884125, complement)

    Chromosome 1 - NC_037328.1Genomic Context describing neighboring genes Neighboring gene inhibitor of carbonic anhydrase Neighboring gene DNA topoisomerase II binding protein 1 Neighboring gene U8 small nucleolar RNA Neighboring gene beaded filament structural protein 2 Neighboring gene transmembrane protein 254-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037328.1 Chromosome 1 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein CDV3 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001192040.2 → NP_001178969.2  protein CDV3 homolog

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000001
      UniProtKB/TrEMBL
      E1BEM3
      Related
      ENSBTAP00070047440.1, ENSBTAT00070077706.1
      Conserved Domains (1) summary
      pfam15359
      Location:81 → 201
      CDV3; Carnitine deficiency-associated protein 3

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037328.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      135867529..135884125 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059890953.1 → XP_059746936.1  protein CDV3 homolog isoform X8

    2. XM_059890981.1 → XP_059746964.1  protein CDV3 homolog isoform X9

    3. XM_005201944.5 → XP_005202001.2  protein CDV3 homolog isoform X2

      Conserved Domains (1) summary
      pfam15359
      Location:81 → 198
      CDV3; Carnitine deficiency-associated protein 3

    4. XM_005201948.3 → XP_005202005.2  protein CDV3 homolog isoform X5

      Conserved Domains (1) summary
      pfam15359
      Location:81 → 200
      CDV3; Carnitine deficiency-associated protein 3

    5. XM_059890902.1 → XP_059746885.1  protein CDV3 homolog isoform X6

    6. XM_059890841.1 → XP_059746824.1  protein CDV3 homolog isoform X3

    7. XM_059890863.1 → XP_059746846.1  protein CDV3 homolog isoform X4

    8. XM_005201943.3 → XP_005202000.2  protein CDV3 homolog isoform X1

      Conserved Domains (1) summary
      pfam15359
      Location:81 → 200
      CDV3; Carnitine deficiency-associated protein 3

    9. XM_015473505.3 → XP_015328991.1  protein CDV3 homolog isoform X9

      Conserved Domains (1) summary
      pfam15359
      Location:1 → 98
      CDV3; Carnitine deficiency-associated protein 3

    10. XM_010801606.4 → XP_010799908.2  protein CDV3 homolog isoform X7

      Conserved Domains (1) summary
      pfam15359
      Location:81 → 198
      CDV3; Carnitine deficiency-associated protein 3
    Nucleotide Protein Strain
    Heading Accession and Version

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