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    CTNNBIP1 catenin beta interacting protein 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 614630, updated on 30-Jan-2025

    Summary

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    Official Symbol
    CTNNBIP1provided by VGNC
    Official Full Name
    catenin beta interacting protein 1provided by VGNC
    Primary source
    VGNC:VGNC:27803
    See related
    BGD:BT22825; EnsemblRapid:ENSBTAG00070018036
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See CTNNBIP1 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 16 NC_037343.1 (43628237..43675421)

    Chromosome 16 - NC_037343.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112441838 Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene nicotinamide nucleotide adenylyltransferase 1 Neighboring gene leucine zipper and CTNNBIP1 domain containing Neighboring gene calsyntenin 1 Neighboring gene U6 spliceosomal RNA Neighboring gene phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037343.1 Chromosome 16 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables beta-catenin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of beta-catenin destruction complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    beta-catenin-interacting protein 1
    Names
    beta-catenin-interacting protein ICAT

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001037142.1 → NP_001032219.1  beta-catenin-interacting protein 1

      See identical proteins and their annotated locations for NP_001032219.1

      Status: PROVISIONAL

      Source sequence(s)
      BT020888
      UniProtKB/Swiss-Prot
      Q5E9N2
      UniProtKB/TrEMBL
      B0JYK9
      Conserved Domains (1) summary
      pfam06384
      Location:1 → 79
      ICAT; Beta-catenin-interacting protein ICAT

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037343.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      43628237..43675421
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059875502.1 → XP_059731485.1  beta-catenin-interacting protein 1 isoform X1

    2. XM_059875503.1 → XP_059731486.1  beta-catenin-interacting protein 1 isoform X1

    3. XM_024976462.2 → XP_024832230.1  beta-catenin-interacting protein 1 isoform X2

      UniProtKB/Swiss-Prot
      Q5E9N2
      UniProtKB/TrEMBL
      B0JYK9
      Related
      ENSBTAP00070024174.1, ENSBTAT00070040689.1
      Conserved Domains (1) summary
      pfam06384
      Location:1 → 79
      ICAT; Beta-catenin-interacting protein ICAT
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5E9N2.1 GenPept UniProtKB/Swiss-Prot:Q5E9N2

    Gene LinkOut

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