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    EIF3J eukaryotic translation initiation factor 3 subunit J [ Bos taurus (domestic cattle) ]

    Gene ID: 539052, updated on 30-Jan-2025

    Summary

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    Official Symbol
    EIF3Jprovided by VGNC
    Official Full Name
    eukaryotic translation initiation factor 3 subunit Jprovided by VGNC
    Primary source
    VGNC:VGNC:28400
    See related
    BGD:BT13430; EnsemblRapid:ENSBTAG00070005142
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See EIF3J in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (102954909..102973919)

    Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene golgi membrane protein 2 Neighboring gene uncharacterized LOC112448642 Neighboring gene CTD small phosphatase like 2 Neighboring gene uncharacterized LOC112448632 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC112448641 Neighboring gene SPG11 vesicle trafficking associated, spatacsin

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Clone Names

    • MGC140057

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables translation initiation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of eukaryotic translation initiation factor 3 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    eukaryotic translation initiation factor 3 subunit J
    Names
    eIF-3-alpha
    eIF3 p35
    eukaryotic translation initiation factor 3 subunit 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001076143.1 → NP_001069611.1  eukaryotic translation initiation factor 3 subunit J

      See identical proteins and their annotated locations for NP_001069611.1

      Status: PROVISIONAL

      Source sequence(s)
      BC119989
      UniProtKB/Swiss-Prot
      A6QPP4, Q0VCU8
      Related
      ENSBTAP00070006637.1, ENSBTAT00070011767.1
      Conserved Domains (1) summary
      pfam08597
      Location:10 → 256
      eIF3_subunit; Translation initiation factor eIF3 subunit

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      102954909..102973919
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024997726.2 → XP_024853494.1  eukaryotic translation initiation factor 3 subunit J isoform X1

      UniProtKB/TrEMBL
      A0AAF6YGR8
      Conserved Domains (1) summary
      pfam08597
      Location:10 → 255
      eIF3_subunit; Translation initiation factor eIF3 subunit
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0VCU8.1 GenPept UniProtKB/Swiss-Prot:Q0VCU8

    Gene LinkOut

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