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    DDX52 DExD-box helicase 52 [ Bos taurus (domestic cattle) ]

    Gene ID: 510826, updated on 1-Jan-2025

    Summary

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    Official Symbol
    DDX52provided by VGNC
    Official Full Name
    DExD-box helicase 52provided by VGNC
    Primary source
    VGNC:VGNC:27975
    See related
    Ensembl:ENSBTAG00000010313
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See DDX52 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 19 NC_037346.1 (13898508..13922590, complement)

    Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene dual specificity phosphatase 14 Neighboring gene synergin gamma Neighboring gene HNF1 homeobox B Neighboring gene uncharacterized LOC101906072

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037346.1 Chromosome 19 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Clone Names

    • MGC139436

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in maturation of SSU-rRNA IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable ATP-dependent RNA helicase DDX52
    Names
    DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
    DEAD box protein 52
    DEAD-box helicase 52
    NP_001096708.1
    XP_059733883.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001103238.1 → NP_001096708.1  probable ATP-dependent RNA helicase DDX52

      See identical proteins and their annotated locations for NP_001096708.1

      Status: PROVISIONAL

      Source sequence(s)
      BC140501
      UniProtKB/Swiss-Prot
      A5D7C1
      UniProtKB/TrEMBL
      A0AAA9TC55
      Related
      ENSBTAP00000013622.4, ENSBTAT00000013622.5
      Conserved Domains (3) summary
      PRK11192
      Location:160 → 591
      PRK11192; ATP-dependent RNA helicase SrmB; Provisional
      pfam00271
      Location:396 → 505
      Helicase_C; Helicase conserved C-terminal domain
      cl21455
      Location:167 → 364
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037346.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      13898508..13922590 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059877900.1 → XP_059733883.1  probable ATP-dependent RNA helicase DDX52 isoform X1

      UniProtKB/TrEMBL
      A0AAA9SML4
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A5D7C1.1 GenPept UniProtKB/Swiss-Prot:A5D7C1

    Gene LinkOut

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