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    COG3 component of oligomeric golgi complex 3 [ Bos taurus (domestic cattle) ]

    Gene ID: 532845, updated on 30-Jan-2025

    Summary

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    Official Symbol
    COG3provided by VGNC
    Official Full Name
    component of oligomeric golgi complex 3provided by VGNC
    Primary source
    VGNC:VGNC:27548
    See related
    EnsemblRapid:ENSBTAG00070027314
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See COG3 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 12 NC_037339.1 (15582729..15643517)

    Chromosome 12 - NC_037339.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA31 Neighboring gene tumor protein, translationally-controlled 1 Neighboring gene solute carrier family 25 member 30 Neighboring gene microRNA mir-7860 Neighboring gene microRNA mir-2285h Neighboring gene glutamate rich 6B Neighboring gene chibby family member 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037339.1 Chromosome 12 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in Golgi organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intra-Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Golgi transport complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cis-Golgi network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    conserved oligomeric Golgi complex subunit 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001206537.1 → NP_001193466.1  conserved oligomeric Golgi complex subunit 3

      Status: VALIDATED

      Source sequence(s)
      BE809290, DV814766, DV886396, DV889869, DY170387, EE363154, EE903906, EE959930, GH302172, GH313515
      UniProtKB/TrEMBL
      A0AAA9T0R7
      Related
      ENSBTAP00070036986.1, ENSBTAT00070062065.1
      Conserved Domains (1) summary
      pfam04136
      Location:132 → 275
      Sec34; Sec34-like family

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037339.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      15582729..15643517
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059892065.1 → XP_059748048.1  conserved oligomeric Golgi complex subunit 3 isoform X2

      UniProtKB/TrEMBL
      A0AAA9T0R7

    2. XM_059892064.1 → XP_059748047.1  conserved oligomeric Golgi complex subunit 3 isoform X1

      UniProtKB/TrEMBL
      A0AAA9T0R7
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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