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    TSEN15 tRNA splicing endonuclease subunit 15 [ Gallus gallus (chicken) ]

    Gene ID: 424448, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TSEN15provided by CGNC
    Official Full Name
    tRNA splicing endonuclease subunit 15provided by CGNC
    Primary source
    CGNC:3550
    See related
    Ensembl:ENSGALG00010011607
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    sen15; C1orf19
    Orthologs
    human mouse all
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    Genomic context

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    See TSEN15 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 8 NC_052539.1 (7763292..7773538)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 8 NC_052580.1 (7774787..7785077)

    Chromosome 8 - NC_052539.1Genomic Context describing neighboring genes Neighboring gene ral guanine nucleotide dissociation stimulator like 1 Neighboring gene collagen beta(1-O)galactosyltransferase 2 Neighboring gene uncharacterized LOC107053945 Neighboring gene C1orf21 homolog Neighboring gene ER degradation enhancing alpha-mannosidase like protein 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tRNA splicing, via endonucleolytic cleavage and ligation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tRNA-splicing endonuclease subunit Sen15
    Names
    TSEN15 tRNA splicing endonuclease subunit
    tRNA splicing endonuclease 15 homolog
    tRNA-intron endonuclease Sen15

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052539.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      7763292..7773538
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046898262.1 → XP_046754218.1  tRNA-splicing endonuclease subunit Sen15 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YBQ7
      Related
      ENSGALP00010015903.1, ENSGALT00010027748.1

    2. XM_422291.6 → XP_422291.1  tRNA-splicing endonuclease subunit Sen15 isoform X1

      See identical proteins and their annotated locations for XP_422291.1

      UniProtKB/TrEMBL
      A0A8V0YIN1
      Related
      ENSGALP00010015902.1, ENSGALT00010027746.1
      Conserved Domains (1) summary
      pfam09631
      Location:60 → 160
      Sen15; Sen15 protein

    3. XM_040705276.2 → XP_040561210.1  tRNA-splicing endonuclease subunit Sen15 isoform X3

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052580.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      7774787..7785077
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046923467.1 → XP_046779423.1  tRNA-splicing endonuclease subunit Sen15 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YBQ7

    2. XM_040677548.2 → XP_040533482.1  tRNA-splicing endonuclease subunit Sen15 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YIN1
      Conserved Domains (1) summary
      pfam09631
      Location:60 → 160
      Sen15; Sen15 protein

    3. XM_040677549.2 → XP_040533483.1  tRNA-splicing endonuclease subunit Sen15 isoform X3

    Nucleotide Protein Strain
    Heading Accession and Version

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