U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    TTF2 transcription termination factor 2 [ Gallus gallus (chicken) ]

    Gene ID: 418376, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Symbol
    TTF2provided by CGNC
    Full Name
    transcription termination factor 2provided by CGNC
    Primary source
    CGNC:11348
    See related
    Ensembl:ENSGALG00010005465
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TTF2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (84392570..84412202)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (84444982..84464585)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene TOR signaling pathway regulator Neighboring gene G protein-coupled receptor 161 Neighboring gene transfer RNA leucine (anticodon CAG) Neighboring gene transfer RNA isoleucine (anticodon AAU)

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP-dependent chromatin remodeler activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    transcription termination factor 2
    Names
    transcription termination factor, RNA polymerase II

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      84392570..84412202
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040649425.2 → XP_040505359.1  transcription termination factor 2

      UniProtKB/TrEMBL
      A0A8V0XP21, A0A8V0XRS5
      Related
      ENSGALP00010007610.1, ENSGALT00010013048.1
      Conserved Domains (3) summary
      PTZ00121
      Location:101 → 290
      PTZ00121; MAEBL; Provisional
      COG0553
      Location:586 → 1176
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cd18072
      Location:583 → 820
      DEXHc_TTF2; DEAH-box helicase domain of TTF2

    2. XM_040649427.2 → XP_040505361.1  transcription termination factor 2

      UniProtKB/TrEMBL
      A0A8V0XP21, A0A8V0XRS5
      Conserved Domains (3) summary
      PTZ00121
      Location:101 → 290
      PTZ00121; MAEBL; Provisional
      COG0553
      Location:586 → 1176
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cd18072
      Location:583 → 820
      DEXHc_TTF2; DEAH-box helicase domain of TTF2

    3. XM_416595.8 → XP_416595.3  transcription termination factor 2

      UniProtKB/TrEMBL
      A0A8V0XP21, A0A8V0XRS5
      Conserved Domains (3) summary
      PTZ00121
      Location:101 → 290
      PTZ00121; MAEBL; Provisional
      COG0553
      Location:586 → 1176
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cd18072
      Location:583 → 820
      DEXHc_TTF2; DEAH-box helicase domain of TTF2

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      84444982..84464585
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040660179.2 → XP_040516113.1  transcription termination factor 2

      UniProtKB/TrEMBL
      A0A8V0XRS5
      Conserved Domains (3) summary
      PTZ00121
      Location:101 → 245
      PTZ00121; MAEBL; Provisional
      COG0553
      Location:554 → 1176
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cd18072
      Location:583 → 820
      DEXHc_TTF2; DEAH-box helicase domain of TTF2

    2. XM_040660180.2 → XP_040516114.1  transcription termination factor 2

      UniProtKB/TrEMBL
      A0A8V0XRS5
      Conserved Domains (3) summary
      PTZ00121
      Location:101 → 245
      PTZ00121; MAEBL; Provisional
      COG0553
      Location:554 → 1176
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cd18072
      Location:583 → 820
      DEXHc_TTF2; DEAH-box helicase domain of TTF2

    3. XM_040660177.2 → XP_040516111.1  transcription termination factor 2

      UniProtKB/TrEMBL
      A0A8V0XRS5
      Conserved Domains (3) summary
      PTZ00121
      Location:101 → 245
      PTZ00121; MAEBL; Provisional
      COG0553
      Location:554 → 1176
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cd18072
      Location:583 → 820
      DEXHc_TTF2; DEAH-box helicase domain of TTF2
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials