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    STXBP6 syntaxin binding protein 6 [ Gallus gallus (chicken) ]

    Gene ID: 423299, updated on 3-Dec-2024

    Summary

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    Symbol
    STXBP6provided by CGNC
    Full Name
    syntaxin binding protein 6provided by CGNC
    Primary source
    CGNC:7482
    See related
    Ensembl:ENSGALG00010004416
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See STXBP6 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (31913037..31992364, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (31894519..31973804, complement)

    Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107053504 Neighboring gene gap junction protein delta 2 Neighboring gene uncharacterized LOC112532551 Neighboring gene uncharacterized LOC112531814

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol-4,5-bisphosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Golgi to plasma membrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of SNARE complex assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of exocyst IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    syntaxin-binding protein 6
    Names
    amisyn
    syntaxin binding protein 6 (amisyn)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001199711.1 → NP_001186640.1  syntaxin-binding protein 6

      Status: VALIDATED

      Source sequence(s)
      BX929546
      UniProtKB/TrEMBL
      A0A8V0XMK1, E1C568
      Related
      ENSGALP00010006031.1, ENSGALT00010010318.1
      Conserved Domains (2) summary
      cd14681
      Location:2 → 131
      PH-STXBP6; PH-like domain of Syntaxin binding protein 6
      cd15892
      Location:149 → 210
      R-SNARE_STXBP6; SNARE domain of STXBP6

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      31913037..31992364 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015287352.4 → XP_015142838.1  syntaxin-binding protein 6 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XMK1, E1C568
      Conserved Domains (2) summary
      cd14681
      Location:2 → 131
      PH-STXBP6; PH-like domain of Syntaxin binding protein 6
      cd15892
      Location:149 → 210
      R-SNARE_STXBP6; SNARE domain of STXBP6

    2. XM_015287353.4 → XP_015142839.1  syntaxin-binding protein 6 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XMK1, E1C568
      Conserved Domains (2) summary
      cd14681
      Location:2 → 131
      PH-STXBP6; PH-like domain of Syntaxin binding protein 6
      cd15892
      Location:149 → 210
      R-SNARE_STXBP6; SNARE domain of STXBP6

    3. XM_040700980.2 → XP_040556914.1  syntaxin-binding protein 6 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XMK1, E1C568
      Conserved Domains (2) summary
      cd14681
      Location:2 → 131
      PH-STXBP6; PH-like domain of Syntaxin binding protein 6
      cd15892
      Location:149 → 210
      R-SNARE_STXBP6; SNARE domain of STXBP6

    4. XM_040700981.2 → XP_040556915.1  syntaxin-binding protein 6 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XMK1, E1C568
      Conserved Domains (2) summary
      cd14681
      Location:2 → 131
      PH-STXBP6; PH-like domain of Syntaxin binding protein 6
      cd15892
      Location:149 → 210
      R-SNARE_STXBP6; SNARE domain of STXBP6

    5. XM_046941752.1 → XP_046797708.1  syntaxin-binding protein 6 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XMK1, E1C568

    6. XM_015287354.3 → XP_015142840.1  syntaxin-binding protein 6 isoform X2

      Conserved Domains (2) summary
      cd15892
      Location:123 → 184
      R-SNARE_STXBP6; SNARE domain of STXBP6
      cl17171
      Location:21 → 105
      PH-like; Pleckstrin homology-like domain

    7. XM_046941753.1 → XP_046797709.1  syntaxin-binding protein 6 isoform X3

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      31894519..31973804 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046918523.1 → XP_046774479.1  syntaxin-binding protein 6 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XMK1, E1C568

    2. XM_046918524.1 → XP_046774480.1  syntaxin-binding protein 6 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XMK1, E1C568

    3. XM_046918525.1 → XP_046774481.1  syntaxin-binding protein 6 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XMK1, E1C568

    4. XM_046918526.1 → XP_046774482.1  syntaxin-binding protein 6 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XMK1, E1C568

    5. XM_046918527.1 → XP_046774483.1  syntaxin-binding protein 6 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XMK1, E1C568

    6. XM_046918529.1 → XP_046774485.1  syntaxin-binding protein 6 isoform X2

    7. XM_046918530.1 → XP_046774486.1  syntaxin-binding protein 6 isoform X3

    Nucleotide Protein Strain
    Heading Accession and Version

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