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    MXRA5 matrix remodeling associated 5 [ Gallus gallus (chicken) ]

    Gene ID: 418657, updated on 17-Aug-2024

    Summary

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    Symbol
    MXRA5provided by CGNC
    Full Name
    matrix remodeling associated 5provided by CGNC
    Primary source
    CGNC:12466
    See related
    Ensembl:ENSGALG00010002235
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human all
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    Genomic context

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    See MXRA5 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (128434343..128454605)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (128387698..128407957)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene protein kinase cAMP-dependent catalytic subunit PRKX Neighboring gene uncharacterized LOC112531505 Neighboring gene uncharacterized LOC112531506 Neighboring gene arylsulfatase family, member H

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Matrix remodeling associated 5 expression in trunk and limb during avian development. Robins JE, et al. Int J Dev Biol, 2018. PMID 29877573
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    matrix-remodeling-associated protein 5
    Names
    matrix-remodelling associated 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      128434343..128454605
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_416853.8 → XP_416853.6  matrix-remodeling-associated protein 5

      UniProtKB/TrEMBL
      A0A8V0XBP9, A0A8V0XF35
      Related
      ENSGALP00010002988.1, ENSGALT00010005042.1
      Conserved Domains (9) summary
      smart00013
      Location:101 → 133
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:292 → 338
      LRRCT; Leucine rich repeat C-terminal domain
      smart00409
      Location:2633 → 2716
      IG; Immunoglobulin
      smart00410
      Location:2824 → 2910
      IG_like; Immunoglobulin like
      COG4886
      Location:133 → 287
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:112 → 130
      LRR_RI; leucine-rich repeat [structural motif]
      pfam05109
      Location:1315 → 1587
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      cd00096
      Location:2832 → 2841
      Ig; Ig strand B [structural motif]
      cl11960
      Location:2248 → 2313
      Ig; Immunoglobulin domain

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      128387698..128407957
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040661104.2 → XP_040517038.1  matrix-remodeling-associated protein 5

      UniProtKB/TrEMBL
      A0A8V0XF35
      Conserved Domains (10) summary
      smart00408
      Location:660 → 726
      IGc2; Immunoglobulin C-2 Type
      smart00013
      Location:101 → 133
      LRRNT; Leucine rich repeat N-terminal domain
      smart00082
      Location:292 → 338
      LRRCT; Leucine rich repeat C-terminal domain
      smart00409
      Location:2633 → 2716
      IG; Immunoglobulin
      smart00410
      Location:2824 → 2910
      IG_like; Immunoglobulin like
      COG4886
      Location:133 → 287
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:112 → 130
      LRR_RI; leucine-rich repeat [structural motif]
      pfam05109
      Location:1315 → 1587
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      cd00096
      Location:2832 → 2841
      Ig; Ig strand B [structural motif]
      cl11960
      Location:2248 → 2313
      Ig; Immunoglobulin domain
    Nucleotide Protein Strain
    Heading Accession and Version

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