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    DYNC1LI2 dynein cytoplasmic 1 light intermediate chain 2 [ Gallus gallus (chicken) ]

    Gene ID: 415793, updated on 3-Dec-2024

    Summary

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    Symbol
    DYNC1LI2provided by CGNC
    Full Name
    dynein cytoplasmic 1 light intermediate chain 2provided by CGNC
    Primary source
    CGNC:50079
    See related
    Ensembl:ENSGALG00010007092
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    DNCLI2
    Orthologs
    human mouse all
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    Genomic context

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    See DYNC1LI2 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 11 NC_052542.1 (10998829..11027103)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 11 NC_052583.1 (11343664..11371989)

    Chromosome 11 - NC_052542.1Genomic Context describing neighboring genes Neighboring gene NEDD8 activating enzyme E1 subunit 1 Neighboring gene carbonic anhydrase 7 Neighboring gene telomere repeat binding bouquet formation protein 1 Neighboring gene uncharacterized LOC124417144 Neighboring gene CKLF like MARVEL transmembrane domain containing 4 Neighboring gene CKLF like MARVEL transmembrane domain containing 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables dynein heavy chain binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in microtubule cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in microtubule-based movement IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of cytoplasmic dynein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cytoplasmic dynein 1 light intermediate chain 2
    Names
    dynein, cytoplasmic, light intermediate polypeptide 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001030573.2 → NP_001025744.1  cytoplasmic dynein 1 light intermediate chain 2

      See identical proteins and their annotated locations for NP_001025744.1

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000248
      UniProtKB/TrEMBL
      A0A8V0XWS5, F1P2G9, Q5ZMQ4
      Related
      ENSGALP00010009464.1, ENSGALT00010016842.1
      Conserved Domains (3) summary
      cd00009
      Location:42 → 96
      AAA; The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, ...
      cd00882
      Location:219 → 284
      Ras_like_GTPase; Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases)
      pfam05783
      Location:26 → 486
      DLIC; Dynein light intermediate chain (DLIC)

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052542.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      10998829..11027103
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015292500.4 → XP_015147986.2  cytoplasmic dynein 1 light intermediate chain 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XWS5
      Conserved Domains (1) summary
      pfam05783
      Location:26 → 477
      DLIC; Dynein light intermediate chain (DLIC)

    2. XM_040707085.2 → XP_040563019.1  cytoplasmic dynein 1 light intermediate chain 2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XWS5, A0A8V0XZP8
      Related
      ENSGALP00010009462.1, ENSGALT00010016840.1
      Conserved Domains (1) summary
      pfam05783
      Location:26 → 455
      DLIC; Dynein light intermediate chain (DLIC)

    3. XM_040707086.2 → XP_040563020.1  cytoplasmic dynein 1 light intermediate chain 2 isoform X3

      UniProtKB/TrEMBL
      A0A8V0XWS5
      Conserved Domains (1) summary
      pfam05783
      Location:26 → 419
      DLIC; Dynein light intermediate chain (DLIC)

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052583.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      11343664..11371989
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046925555.1 → XP_046781511.1  cytoplasmic dynein 1 light intermediate chain 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XWS5

    2. XM_046925556.1 → XP_046781512.1  cytoplasmic dynein 1 light intermediate chain 2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XWS5, A0A8V0XZP8

    3. XM_046925557.1 → XP_046781513.1  cytoplasmic dynein 1 light intermediate chain 2 isoform X3

      UniProtKB/TrEMBL
      A0A8V0XWS5
    Nucleotide Protein Strain
    Heading Accession and Version

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    Research Materials