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    AP4E1 adaptor related protein complex 4 epsilon 1 subunit [ Gallus gallus (chicken) ]

    Gene ID: 415425, updated on 3-Dec-2024

    Summary

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    Official Symbol
    AP4E1provided by CGNC
    Official Full Name
    adaptor related protein complex 4 epsilon 1 subunitprovided by CGNC
    Primary source
    CGNC:49980
    See related
    Ensembl:ENSGALG00010022573
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See AP4E1 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 10 NC_052541.1 (9150592..9169374)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 10 NC_052582.1 (9022634..9041440)

    Chromosome 10 - NC_052541.1Genomic Context describing neighboring genes Neighboring gene tropomodulin 2 Neighboring gene LysM domain containing 2 Neighboring gene secretogranin III Neighboring gene TNF alpha induced protein 8 like 3 Neighboring gene gliomedin Neighboring gene cytochrome P450 family 19 subfamily A member 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cargo adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in receptor-mediated endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of AP-4 adaptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of membrane coat IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    AP-4 complex subunit epsilon-1
    Names
    adaptor related protein complex 4 subunit epsilon 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052541.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      9150592..9169374
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025153883.3 → XP_025009651.2  AP-4 complex subunit epsilon-1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZP15, A0A8V0ZWH6
      Related
      ENSGALP00010033216.1, ENSGALT00010054940.1
      Conserved Domains (1) summary
      COG5096
      Location:82 → 588
      COG5096; Vesicle coat complex, various subunits [Intracellular trafficking, secretion, and vesicular transport]

    2. XM_040706493.2 → XP_040562427.1  AP-4 complex subunit epsilon-1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZWH6
      Conserved Domains (1) summary
      COG5096
      Location:82 → 588
      COG5096; Vesicle coat complex, various subunits [Intracellular trafficking, secretion, and vesicular transport]

    3. XM_025153884.3 → XP_025009652.2  AP-4 complex subunit epsilon-1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZWH6
      Conserved Domains (1) summary
      COG5096
      Location:82 → 299
      COG5096; Vesicle coat complex, various subunits [Intracellular trafficking, secretion, and vesicular transport]

    4. XM_046899126.1 → XP_046755082.1  AP-4 complex subunit epsilon-1 isoform X6

      UniProtKB/TrEMBL
      A0A8V0ZWH6

    5. XM_046899129.1 → XP_046755085.1  AP-4 complex subunit epsilon-1 isoform X6

      UniProtKB/TrEMBL
      A0A8V0ZWH6

    6. XM_046899128.1 → XP_046755084.1  AP-4 complex subunit epsilon-1 isoform X6

      UniProtKB/TrEMBL
      A0A8V0ZWH6

    7. XM_025153885.3 → XP_025009653.2  AP-4 complex subunit epsilon-1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0ZWH6
      Conserved Domains (1) summary
      COG5096
      Location:82 → 588
      COG5096; Vesicle coat complex, various subunits [Intracellular trafficking, secretion, and vesicular transport]

    8. XM_025153891.3 → XP_025009659.2  AP-4 complex subunit epsilon-1 isoform X6

      UniProtKB/TrEMBL
      A0A8V0ZWH6

    9. XM_025153888.3 → XP_025009656.2  AP-4 complex subunit epsilon-1 isoform X6

      UniProtKB/TrEMBL
      A0A8V0ZWH6

    10. XM_025153892.3 → XP_025009660.2  AP-4 complex subunit epsilon-1 isoform X6

      UniProtKB/TrEMBL
      A0A8V0ZWH6

    11. XM_025153890.3 → XP_025009658.2  AP-4 complex subunit epsilon-1 isoform X6

      UniProtKB/TrEMBL
      A0A8V0ZWH6

    12. XM_025153886.3 → XP_025009654.2  AP-4 complex subunit epsilon-1 isoform X5

      UniProtKB/TrEMBL
      A0A8V0ZWH6
      Related
      ENSGALP00010033215.1, ENSGALT00010054937.1
      Conserved Domains (1) summary
      COG5096
      Location:13 → 519
      COG5096; Vesicle coat complex, various subunits [Intracellular trafficking, secretion, and vesicular transport]

    13. XM_046899127.1 → XP_046755083.1  AP-4 complex subunit epsilon-1 isoform X6

      UniProtKB/TrEMBL
      A0A8V0ZWH6

    14. XM_040706495.2 → XP_040562429.1  AP-4 complex subunit epsilon-1 isoform X6

      UniProtKB/TrEMBL
      A0A8V0ZWH6

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052582.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      9022634..9041440
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040679912.2 → XP_040535846.1  AP-4 complex subunit epsilon-1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZWH6
      Conserved Domains (1) summary
      COG5096
      Location:82 → 588
      COG5096; Vesicle coat complex, various subunits [Intracellular trafficking, secretion, and vesicular transport]

    2. XM_040679913.2 → XP_040535847.1  AP-4 complex subunit epsilon-1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZWH6
      Conserved Domains (1) summary
      COG5096
      Location:82 → 445
      COG5096; Vesicle coat complex, various subunits [Intracellular trafficking, secretion, and vesicular transport]

    3. XM_040679914.2 → XP_040535848.1  AP-4 complex subunit epsilon-1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZWH6
      Conserved Domains (1) summary
      COG5096
      Location:82 → 299
      COG5096; Vesicle coat complex, various subunits [Intracellular trafficking, secretion, and vesicular transport]

    4. XM_046925021.1 → XP_046780977.1  AP-4 complex subunit epsilon-1 isoform X6

      UniProtKB/TrEMBL
      A0A8V0ZWH6

    5. XM_046925020.1 → XP_046780976.1  AP-4 complex subunit epsilon-1 isoform X6

      UniProtKB/TrEMBL
      A0A8V0ZWH6

    6. XM_040679915.2 → XP_040535849.1  AP-4 complex subunit epsilon-1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0ZWH6
      Conserved Domains (1) summary
      COG5096
      Location:82 → 588
      COG5096; Vesicle coat complex, various subunits [Intracellular trafficking, secretion, and vesicular transport]

    7. XM_040679919.2 → XP_040535853.1  AP-4 complex subunit epsilon-1 isoform X6

      UniProtKB/TrEMBL
      A0A8V0ZWH6
      Conserved Domains (1) summary
      COG5096
      Location:1 → 433
      COG5096; Vesicle coat complex, various subunits [Intracellular trafficking, secretion, and vesicular transport]

    8. XM_040679918.2 → XP_040535852.1  AP-4 complex subunit epsilon-1 isoform X6

      UniProtKB/TrEMBL
      A0A8V0ZWH6
      Conserved Domains (1) summary
      COG5096
      Location:1 → 433
      COG5096; Vesicle coat complex, various subunits [Intracellular trafficking, secretion, and vesicular transport]

    9. XM_040679922.2 → XP_040535856.1  AP-4 complex subunit epsilon-1 isoform X6

      UniProtKB/TrEMBL
      A0A8V0ZWH6
      Conserved Domains (1) summary
      COG5096
      Location:1 → 433
      COG5096; Vesicle coat complex, various subunits [Intracellular trafficking, secretion, and vesicular transport]

    10. XM_040679921.2 → XP_040535855.1  AP-4 complex subunit epsilon-1 isoform X6

      UniProtKB/TrEMBL
      A0A8V0ZWH6
      Conserved Domains (1) summary
      COG5096
      Location:1 → 433
      COG5096; Vesicle coat complex, various subunits [Intracellular trafficking, secretion, and vesicular transport]

    11. XM_040679916.2 → XP_040535850.1  AP-4 complex subunit epsilon-1 isoform X5

      UniProtKB/TrEMBL
      A0A8V0ZWH6
      Conserved Domains (1) summary
      COG5096
      Location:13 → 519
      COG5096; Vesicle coat complex, various subunits [Intracellular trafficking, secretion, and vesicular transport]

    12. XM_046925019.1 → XP_046780975.1  AP-4 complex subunit epsilon-1 isoform X6

      UniProtKB/TrEMBL
      A0A8V0ZWH6

    13. XM_040679923.2 → XP_040535857.1  AP-4 complex subunit epsilon-1 isoform X6

      UniProtKB/TrEMBL
      A0A8V0ZWH6
      Conserved Domains (1) summary
      COG5096
      Location:1 → 433
      COG5096; Vesicle coat complex, various subunits [Intracellular trafficking, secretion, and vesicular transport]
    Nucleotide Protein Strain
    Heading Accession and Version

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