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    ELL2 elongation factor for RNA polymerase II 2 [ Gallus gallus (chicken) ]

    Gene ID: 427119, updated on 3-Dec-2024

    Summary

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    Symbol
    ELL2provided by CGNC
    Full Name
    elongation factor for RNA polymerase II 2provided by CGNC
    Primary source
    CGNC:10880
    See related
    Ensembl:ENSGALG00010012711
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See ELL2 in Genome Data Viewer
    Location:
    chromosome: Z
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (58081286..58137707)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (58081286..58137707)

    Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene proprotein convertase subtilisin/kexin type 1 Neighboring gene uncharacterized LOC121108264 Neighboring gene glutaredoxin Neighboring gene Rho related BTB domain containing 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of transcription elongation by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in snRNA transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transcription elongation by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of transcription elongation factor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA polymerase II elongation factor ELL2
    Names
    elongation factor, RNA polymerase II, 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      58081286..58137707
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_424711.7 → XP_424711.2  RNA polymerase II elongation factor ELL2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YFI4
      Related
      ENSGALP00010017653.1, ENSGALT00010030436.1
      Conserved Domains (2) summary
      pfam07303
      Location:531 → 628
      Occludin_ELL; Occludin homology domain
      pfam10390
      Location:6 → 283
      ELL; RNA polymerase II elongation factor ELL

    2. XM_040655732.2 → XP_040511666.1  RNA polymerase II elongation factor ELL2 isoform X4

      UniProtKB/TrEMBL
      A0A8V0YFF8
      Conserved Domains (2) summary
      pfam07303
      Location:404 → 505
      Occludin_ELL; Occludin homology domain
      pfam10390
      Location:30 → 161
      ELL; RNA polymerase II elongation factor ELL

    3. XM_015280540.4 → XP_015136026.2  RNA polymerase II elongation factor ELL2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YFG3
      Related
      ENSGALP00010017638.1, ENSGALT00010030415.1

    4. XM_025144981.3 → XP_025000749.1  RNA polymerase II elongation factor ELL2 isoform X4

      UniProtKB/TrEMBL
      A0A8V0YFF8
      Conserved Domains (2) summary
      pfam07303
      Location:404 → 505
      Occludin_ELL; Occludin homology domain
      pfam10390
      Location:30 → 161
      ELL; RNA polymerase II elongation factor ELL

    5. XM_046905537.1 → XP_046761493.1  RNA polymerase II elongation factor ELL2 isoform X4

      UniProtKB/TrEMBL
      A0A8V0YFF8

    6. XM_040655731.1 → XP_040511665.1  RNA polymerase II elongation factor ELL2 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YFF8

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      58081286..58137707
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046936922.1 → XP_046792878.1  RNA polymerase II elongation factor ELL2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YFI4

    2. XM_046936927.1 → XP_046792883.1  RNA polymerase II elongation factor ELL2 isoform X4

      UniProtKB/TrEMBL
      A0A8V0YFF8

    3. XM_046936923.1 → XP_046792879.1  RNA polymerase II elongation factor ELL2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YFG3

    4. XM_046936925.1 → XP_046792881.1  RNA polymerase II elongation factor ELL2 isoform X4

      UniProtKB/TrEMBL
      A0A8V0YFF8

    5. XM_046936926.1 → XP_046792882.1  RNA polymerase II elongation factor ELL2 isoform X4

      UniProtKB/TrEMBL
      A0A8V0YFF8

    6. XM_046936924.1 → XP_046792880.1  RNA polymerase II elongation factor ELL2 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YFF8
    Nucleotide Protein Strain
    Heading Accession and Version

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