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    TRAK1 trafficking kinesin protein 1 [ Gallus gallus (chicken) ]

    Gene ID: 420714, updated on 3-Dec-2024

    Summary

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    Symbol
    TRAK1provided by CGNC
    Full Name
    trafficking kinesin protein 1provided by CGNC
    Primary source
    CGNC:9049
    See related
    Ensembl:ENSGALG00010016410
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See TRAK1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (43608730..43739806)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (43658754..43788750)

    Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene catenin beta 1 Neighboring gene unc-51 like kinase 4 Neighboring gene transfer RNA arginine (anticodon ACG) Neighboring gene cholecystokinin Neighboring gene uncharacterized LOC121110089

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GABA receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in anterograde axonal transport of mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endosome to lysosome transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neurogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in dendrite IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    trafficking kinesin-binding protein 1
    Names
    trafficking protein, kinesin binding 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      43608730..43739806
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046938177.1 → XP_046794133.1  trafficking kinesin-binding protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A8V0Z2J2

    2. XM_046938178.1 → XP_046794134.1  trafficking kinesin-binding protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A8V0Z2J2

    3. XM_040696040.2 → XP_040551974.1  trafficking kinesin-binding protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A8V0Z2J2
      Conserved Domains (1) summary
      COG1196
      Location:2 → 249
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    4. XM_046938176.1 → XP_046794132.1  trafficking kinesin-binding protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A8V0Z2J2

    5. XM_004939468.5 → XP_004939525.2  trafficking kinesin-binding protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Z2K5
      Related
      ENSGALP00010022841.1, ENSGALT00010039568.1
      Conserved Domains (1) summary
      COG1196
      Location:202 → 449
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    6. XM_418813.7 → XP_418813.4  trafficking kinesin-binding protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Z2K5
      Conserved Domains (1) summary
      COG1196
      Location:202 → 449
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    7. XM_025147511.3 → XP_025003279.1  trafficking kinesin-binding protein 1 isoform X7

      UniProtKB/TrEMBL
      A0A8V0YW45
      Related
      ENSGALP00010022839.1, ENSGALT00010039565.1
      Conserved Domains (2) summary
      pfam04849
      Location:146 → 449
      HAP1_N; HAP1 N-terminal conserved region
      pfam12448
      Location:510 → 678
      Milton; Kinesin associated protein

    8. XM_004939471.5 → XP_004939528.2  trafficking kinesin-binding protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0Z2J2
      Related
      ENSGALP00010022831.1, ENSGALT00010039554.1
      Conserved Domains (1) summary
      COG1196
      Location:32 → 279
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    9. XM_004939479.5 → XP_004939536.3  trafficking kinesin-binding protein 1 isoform X6

      UniProtKB/TrEMBL
      A0A8V0Z2J2
      Related
      ENSGALP00010022835.1, ENSGALT00010039559.1
      Conserved Domains (1) summary
      COG1196
      Location:32 → 279
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    10. XM_040696041.2 → XP_040551975.1  trafficking kinesin-binding protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A8V0Z2J2
      Conserved Domains (1) summary
      COG1196
      Location:2 → 249
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    11. XM_046938179.1 → XP_046794135.1  trafficking kinesin-binding protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A8V0Z2J2

    12. XM_004939470.5 → XP_004939527.2  trafficking kinesin-binding protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YW29
      Related
      ENSGALP00010022824.1, ENSGALT00010039542.1
      Conserved Domains (1) summary
      TIGR02168
      Location:24 → 291
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      43658754..43788750
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046912235.1 → XP_046768191.1  trafficking kinesin-binding protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A8V0Z2J2

    2. XM_046912236.1 → XP_046768192.1  trafficking kinesin-binding protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A8V0Z2J2

    3. XM_040665788.2 → XP_040521722.1  trafficking kinesin-binding protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A8V0Z2J2
      Conserved Domains (1) summary
      COG1196
      Location:2 → 249
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    4. XM_046912234.1 → XP_046768190.1  trafficking kinesin-binding protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A8V0Z2J2

    5. XM_040665783.2 → XP_040521717.1  trafficking kinesin-binding protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Z2K5
      Conserved Domains (1) summary
      COG1196
      Location:202 → 449
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    6. XM_040665784.2 → XP_040521718.1  trafficking kinesin-binding protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Z2K5
      Conserved Domains (1) summary
      COG1196
      Location:202 → 449
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    7. XM_040665795.2 → XP_040521729.1  trafficking kinesin-binding protein 1 isoform X7

      UniProtKB/TrEMBL
      A0A8V0YW45
      Conserved Domains (2) summary
      pfam04849
      Location:146 → 449
      HAP1_N; HAP1 N-terminal conserved region
      pfam12448
      Location:510 → 678
      Milton; Kinesin associated protein

    8. XM_040665787.2 → XP_040521721.1  trafficking kinesin-binding protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0Z2J2
      Conserved Domains (1) summary
      COG1196
      Location:32 → 279
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    9. XM_040665791.2 → XP_040521725.1  trafficking kinesin-binding protein 1 isoform X6

      UniProtKB/TrEMBL
      A0A8V0Z2J2
      Conserved Domains (1) summary
      COG1196
      Location:32 → 279
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    10. XM_040665789.2 → XP_040521723.1  trafficking kinesin-binding protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A8V0Z2J2
      Conserved Domains (1) summary
      COG1196
      Location:2 → 249
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    11. XM_046912237.1 → XP_046768193.1  trafficking kinesin-binding protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A8V0Z2J2

    12. XM_040665785.2 → XP_040521719.1  trafficking kinesin-binding protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YW29
      Conserved Domains (1) summary
      TIGR02168
      Location:24 → 291
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    Nucleotide Protein
    Heading Accession and Version

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