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    LTBP2 latent transforming growth factor beta binding protein 2 [ Gallus gallus (chicken) ]

    Gene ID: 428888, updated on 17-Aug-2024

    Summary

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    Symbol
    LTBP2provided by CGNC
    Full Name
    latent transforming growth factor beta binding protein 2provided by CGNC
    Primary source
    CGNC:53503
    See related
    Ensembl:ENSGALG00010004325
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    LTBP3
    Orthologs
    human mouse all
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    Genomic context

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    See LTBP2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    36
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (37437806..37498502, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (37407623..37468358, complement)

    Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene iron-sulfur cluster assembly 2 Neighboring gene NPC intracellular cholesterol transporter 2 Neighboring gene apoptosis resistant E3 ubiquitin protein ligase 1 Neighboring gene FCF1 rRNA-processing protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    latent-transforming growth factor beta-binding protein 2
    Names
    latent transforming growth factor beta binding protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      37437806..37498502 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040701992.1 → XP_040557926.1  latent-transforming growth factor beta-binding protein 2 isoform X6

      Conserved Domains (1) summary
      smart00179
      Location:1096 → 1137
      EGF_CA; Calcium-binding EGF-like domain

    2. XM_040701990.2 → XP_040557924.1  latent-transforming growth factor beta-binding protein 2 isoform X2

      Conserved Domains (2) summary
      smart00179
      Location:1203 → 1244
      EGF_CA; Calcium-binding EGF-like domain
      PHA03379
      Location:53 → 253
      PHA03379; EBNA-3A; Provisional

    3. XM_040701991.2 → XP_040557925.1  latent-transforming growth factor beta-binding protein 2 isoform X4

      Conserved Domains (2) summary
      smart00179
      Location:1187 → 1228
      EGF_CA; Calcium-binding EGF-like domain
      PHA03379
      Location:53 → 253
      PHA03379; EBNA-3A; Provisional

    4. XM_015287677.4 → XP_015143163.3  latent-transforming growth factor beta-binding protein 2 isoform X3

      UniProtKB/TrEMBL
      A0A8V0XM70
      Related
      ENSGALP00010005892.1, ENSGALT00010010088.1
      Conserved Domains (2) summary
      smart00179
      Location:1196 → 1237
      EGF_CA; Calcium-binding EGF-like domain
      PHA03379
      Location:53 → 277
      PHA03379; EBNA-3A; Provisional

    5. XM_015287679.4 → XP_015143165.3  latent-transforming growth factor beta-binding protein 2 isoform X5

      UniProtKB/TrEMBL
      A0A8V0XNX3
      Related
      ENSGALP00010005895.1, ENSGALT00010010092.1
      Conserved Domains (2) summary
      smart00179
      Location:1186 → 1227
      EGF_CA; Calcium-binding EGF-like domain
      PHA03379
      Location:53 → 253
      PHA03379; EBNA-3A; Provisional

    6. XM_015287676.4 → XP_015143162.3  latent-transforming growth factor beta-binding protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XNW8
      Related
      ENSGALP00010005890.1, ENSGALT00010010083.1
      Conserved Domains (2) summary
      smart00179
      Location:1228 → 1269
      EGF_CA; Calcium-binding EGF-like domain
      PHA03379
      Location:53 → 253
      PHA03379; EBNA-3A; Provisional

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      37407623..37468358 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040672723.1 → XP_040528657.1  latent-transforming growth factor beta-binding protein 2 isoform X6

      Conserved Domains (1) summary
      smart00179
      Location:1096 → 1137
      EGF_CA; Calcium-binding EGF-like domain

    2. XM_040672719.2 → XP_040528653.1  latent-transforming growth factor beta-binding protein 2 isoform X2

      Conserved Domains (2) summary
      smart00179
      Location:1203 → 1244
      EGF_CA; Calcium-binding EGF-like domain
      PHA03379
      Location:53 → 253
      PHA03379; EBNA-3A; Provisional

    3. XM_040672721.2 → XP_040528655.1  latent-transforming growth factor beta-binding protein 2 isoform X4

      Conserved Domains (2) summary
      smart00179
      Location:1187 → 1228
      EGF_CA; Calcium-binding EGF-like domain
      PHA03379
      Location:53 → 253
      PHA03379; EBNA-3A; Provisional

    4. XM_040672720.2 → XP_040528654.1  latent-transforming growth factor beta-binding protein 2 isoform X3

      Conserved Domains (2) summary
      smart00179
      Location:1196 → 1237
      EGF_CA; Calcium-binding EGF-like domain
      PHA03379
      Location:53 → 253
      PHA03379; EBNA-3A; Provisional

    5. XM_040672722.2 → XP_040528656.1  latent-transforming growth factor beta-binding protein 2 isoform X5

      Conserved Domains (2) summary
      smart00179
      Location:1186 → 1227
      EGF_CA; Calcium-binding EGF-like domain
      PHA03379
      Location:53 → 253
      PHA03379; EBNA-3A; Provisional

    6. XM_040672718.2 → XP_040528652.1  latent-transforming growth factor beta-binding protein 2 isoform X1

      Conserved Domains (2) summary
      smart00179
      Location:1228 → 1269
      EGF_CA; Calcium-binding EGF-like domain
      PHA03379
      Location:53 → 253
      PHA03379; EBNA-3A; Provisional

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001282376.1: Suppressed sequence

      Description
      NM_001282376.1: This RefSeq was suppressed temporarily based on the calculation that the encoded protein was shorter than proteins from the putative ortholog from cow: LTBP2 (GeneID:281905).
    Nucleotide Protein Strain
    Heading Accession and Version

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