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    CYP2R1 cytochrome P450 family 2 subfamily R member 1 [ Gallus gallus (chicken) ]

    Gene ID: 423065, updated on 17-Aug-2024

    Summary

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    Symbol
    CYP2R1provided by CGNC
    Full Name
    cytochrome P450 family 2 subfamily R member 1provided by CGNC
    Primary source
    CGNC:4536
    See related
    Ensembl:ENSGALG00010023724
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See CYP2R1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (10194092..10203138, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (10163633..10172690, complement)

    Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene coatomer protein complex subunit beta 1 Neighboring gene proteasome subunit alpha 1 Neighboring gene phosphodiesterase 3B Neighboring gene calcitonin Neighboring gene INSC spindle orientation adaptor protein Neighboring gene uncharacterized LOC121110970

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in organic acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in xenobiotic metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vitamin D 25-hydroxylase
    Names
    cytochrome P450, family 2, subfamily R, polypeptide 1
    XP_040529333.1
    XP_040529335.1
    XP_040557286.1
    XP_420996.4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      10194092..10203138 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_420996.8 → XP_420996.4  vitamin D 25-hydroxylase isoform X1

      Conserved Domains (1) summary
      cl12078
      Location:195 → 646
      p450; Cytochrome P450

    2. XM_040701352.2 → XP_040557286.1  vitamin D 25-hydroxylase isoform X2

      UniProtKB/TrEMBL
      A0A8V1A1N1, A0A8V1A1N5
      Related
      ENSGALP00010035100.1, ENSGALT00010057835.1
      Conserved Domains (1) summary
      COG2124
      Location:3 → 375
      CypX; Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism, Defense mechanisms]

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      10163633..10172690 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040673399.2 → XP_040529333.1  vitamin D 25-hydroxylase isoform X1

      Conserved Domains (1) summary
      cl12078
      Location:195 → 646
      p450; Cytochrome P450

    2. XM_040673401.2 → XP_040529335.1  vitamin D 25-hydroxylase isoform X2

      UniProtKB/TrEMBL
      A0A8V1A1N1, A0A8V1A1N5
      Conserved Domains (1) summary
      COG2124
      Location:3 → 375
      CypX; Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism, Defense mechanisms]
    Nucleotide Protein Strain
    Heading Accession and Version

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