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    SLC24A4 solute carrier family 24 member 4 [ Gallus gallus (chicken) ]

    Gene ID: 772279, updated on 17-Aug-2024

    Summary

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    Symbol
    SLC24A4provided by CGNC
    Full Name
    solute carrier family 24 member 4provided by CGNC
    Primary source
    CGNC:8205
    See related
    Ensembl:ENSGALG00010015386
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See SLC24A4 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (44170900..44256447)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (44140606..44226185)

    Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112532582 Neighboring gene uncharacterized LOC121110931 Neighboring gene Ras and Rab interactor 3 Neighboring gene uncharacterized LOC121110932 Neighboring gene legumain

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium, potassium:sodium antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular calcium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sensory perception of smell IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sodium/potassium/calcium exchanger 4
    Names
    solute carrier family 24 (sodium/potassium/calcium exchanger), member 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      44170900..44256447
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001235437.7 → XP_001235438.2  sodium/potassium/calcium exchanger 4 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YS99, A0A8V0YYT1
      Related
      ENSGALP00010021507.1, ENSGALT00010036953.1
      Conserved Domains (1) summary
      TIGR00927
      Location:64 → 595
      2A1904; K+-dependent Na+/Ca+ exchanger

    2. XM_004941876.5 → XP_004941933.1  sodium/potassium/calcium exchanger 4 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YYT1
      Conserved Domains (1) summary
      TIGR00927
      Location:64 → 576
      2A1904; K+-dependent Na+/Ca+ exchanger

    3. XM_040701580.1 → XP_040557514.1  sodium/potassium/calcium exchanger 4 isoform X3

      Conserved Domains (1) summary
      TIGR00927
      Location:1 → 477
      2A1904; K+-dependent Na+/Ca+ exchanger

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      44140606..44226185
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040673008.2 → XP_040528942.1  sodium/potassium/calcium exchanger 4 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YS99, A0A8V0YYT1
      Conserved Domains (1) summary
      TIGR00927
      Location:64 → 595
      2A1904; K+-dependent Na+/Ca+ exchanger

    2. XM_040673009.2 → XP_040528943.1  sodium/potassium/calcium exchanger 4 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YYT1
      Conserved Domains (1) summary
      TIGR00927
      Location:64 → 576
      2A1904; K+-dependent Na+/Ca+ exchanger

    3. XM_040673010.1 → XP_040528944.1  sodium/potassium/calcium exchanger 4 isoform X3

      Conserved Domains (1) summary
      TIGR00927
      Location:1 → 477
      2A1904; K+-dependent Na+/Ca+ exchanger
    Nucleotide Protein Strain
    Heading Accession and Version

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