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    GZF1 GDNF inducible zinc finger protein 1 [ Gallus gallus (chicken) ]

    Gene ID: 421233, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GZF1provided by CGNC
    Official Full Name
    GDNF inducible zinc finger protein 1provided by CGNC
    Primary source
    CGNC:22140
    See related
    Ensembl:ENSGALG00010018037
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    ZNF568; ZNF605
    Orthologs
    human mouse all
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    Genomic context

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    See GZF1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (3460595..3470531, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (3384455..3394399, complement)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene translation initiation factor IF-2-like Neighboring gene zinc finger CCCH-type containing 8 Neighboring gene uncharacterized LOC101751874 Neighboring gene NSF attachment protein beta Neighboring gene GDNF inducible zinc finger protein 1 like Neighboring gene uncharacterized LOC121110245 Neighboring gene CD93 molecule

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cytokine production IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of immune system process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    GDNF-inducible zinc finger protein 1
    Names
    zinc finger protein 568
    zinc finger protein 605

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001349739.2 → NP_001336668.2  GDNF-inducible zinc finger protein 1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000060
      UniProtKB/TrEMBL
      A0A8V0YY08
      Related
      ENSGALP00010025930.1, ENSGALT00010043597.1
      Conserved Domains (3) summary
      COG5048
      Location:399 → 587
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:515 → 535
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd18211
      Location:6 → 133
      BTB_POZ_ZBTB23_GZF1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in glial cell line-derived neurotrophic factor-inducible zinc finger protein 1 (GZF1)

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      3460595..3470531 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025148638.2 → XP_025004406.2  GDNF-inducible zinc finger protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YY08
      Conserved Domains (3) summary
      COG5048
      Location:399 → 587
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:515 → 535
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd18211
      Location:6 → 133
      BTB_POZ_ZBTB23_GZF1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in glial cell line-derived neurotrophic factor-inducible zinc finger protein 1 (GZF1)

    2. XM_025148637.3 → XP_025004405.2  GDNF-inducible zinc finger protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YY08
      Conserved Domains (3) summary
      COG5048
      Location:399 → 587
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:515 → 535
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd18211
      Location:6 → 133
      BTB_POZ_ZBTB23_GZF1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in glial cell line-derived neurotrophic factor-inducible zinc finger protein 1 (GZF1)

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      3384455..3394399 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046913552.1 → XP_046769508.1  GDNF-inducible zinc finger protein 1 isoform X1

    2. XM_046913551.1 → XP_046769507.1  GDNF-inducible zinc finger protein 1 isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version

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