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    TRAPPC10 trafficking protein particle complex 10 [ Gallus gallus (chicken) ]

    Gene ID: 771556, updated on 17-Aug-2024

    Summary

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    Symbol
    TRAPPC10provided by CGNC
    Full Name
    trafficking protein particle complex 10provided by CGNC
    Primary source
    CGNC:56869
    See related
    Ensembl:ENSGALG00010011973
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See TRAPPC10 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (110351101..110393506)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (110436414..110478864)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124417566 Neighboring gene 1-acylglycerol-3-phosphate O-acyltransferase 3 Neighboring gene uncharacterized LOC121107597 Neighboring gene PWP2 small subunit processome component Neighboring gene glutamine amidotransferase like class 1 domain containing 3A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in early endosome to Golgi transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intra-Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of TRAPPII protein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    trafficking protein particle complex subunit 10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      110351101..110393506
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003640505.6 → XP_003640553.3  trafficking protein particle complex subunit 10 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y733
      Related
      ENSGALP00010016473.1, ENSGALT00010028662.1
      Conserved Domains (1) summary
      pfam11817
      Location:467 → 556
      Foie-gras_1; Foie gras liver health family 1

    2. XM_040652702.2 → XP_040508636.1  trafficking protein particle complex subunit 10 isoform X2

      Conserved Domains (1) summary
      pfam11817
      Location:467 → 556
      Foie-gras_1; Foie gras liver health family 1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      110436414..110478864
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040659768.2 → XP_040515702.1  trafficking protein particle complex subunit 10 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y733
      Conserved Domains (1) summary
      pfam11817
      Location:467 → 556
      Foie-gras_1; Foie gras liver health family 1

    2. XM_040659769.2 → XP_040515703.1  trafficking protein particle complex subunit 10 isoform X2

      Conserved Domains (1) summary
      pfam11817
      Location:467 → 556
      Foie-gras_1; Foie gras liver health family 1
    Nucleotide Protein
    Heading Accession and Version

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