U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    DENND6B DENN domain containing 6B [ Gallus gallus (chicken) ]

    Gene ID: 426252, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Symbol
    DENND6Bprovided by CGNC
    Full Name
    DENN domain containing 6Bprovided by CGNC
    Primary source
    CGNC:10312
    See related
    Ensembl:ENSGALG00010006327
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    FAM116B
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See DENND6B in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (1012012..1031255, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (1016384..1035655, complement)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene ADP-ribosylation factor 5 Neighboring gene GRIP and coiled-coil domain containing 1 Neighboring gene protein phosphatase 6, regulatory subunit 2 Neighboring gene microRNA 1651 Neighboring gene SET binding factor 1 Neighboring gene uncharacterized LOC121109567

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in recycling endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein DENND6B
    Names
    DENN/MADD domain containing 6B
    family with sequence similarity 116, member B

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      1012012..1031255 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025152965.3 → XP_025008733.2  protein DENND6B isoform X1

      UniProtKB/TrEMBL
      A0A8V0XL11, A0A8V0XSD9
      Related
      ENSGALP00010008889.1, ENSGALT00010015127.1
      Conserved Domains (1) summary
      cl11519
      Location:138 → 325
      DENN; DENN (AEX-3) domain

    2. XM_040650569.2 → XP_040506503.1  protein DENND6B isoform X5

      UniProtKB/TrEMBL
      A0A8V0XL11
      Related
      ENSGALP00010008877.1, ENSGALT00010015112.1
      Conserved Domains (1) summary
      cl11519
      Location:31 → 191
      DENN; DENN (AEX-3) domain

    3. XM_046903136.1 → XP_046759092.1  protein DENND6B isoform X5

      UniProtKB/TrEMBL
      A0A8V0XL11

    4. XM_040650552.2 → XP_040506486.1  protein DENND6B isoform X2

      UniProtKB/TrEMBL
      A0A8V0XL11
      Conserved Domains (1) summary
      cl11519
      Location:138 → 298
      DENN; DENN (AEX-3) domain

    5. XM_040650559.2 → XP_040506493.1  protein DENND6B isoform X3

      UniProtKB/TrEMBL
      A0A8V0XL11
      Conserved Domains (1) summary
      cl11519
      Location:138 → 325
      DENN; DENN (AEX-3) domain

    6. XM_040650567.2 → XP_040506501.1  protein DENND6B isoform X4

      UniProtKB/TrEMBL
      A0A8V0XL11
      Conserved Domains (1) summary
      cl11519
      Location:138 → 325
      DENN; DENN (AEX-3) domain

    RNA

    1. XR_005841051.2 RNA Sequence

      Related
      ENSGALT00010015123.1

    2. XR_005841053.2 RNA Sequence

      Related
      ENSGALT00010015097.1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      1016384..1035655 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040659874.2 → XP_040515808.1  protein DENND6B isoform X1

      UniProtKB/TrEMBL
      A0A8V0XL11, A0A8V0XSD9
      Conserved Domains (1) summary
      cl11519
      Location:138 → 325
      DENN; DENN (AEX-3) domain

    2. XM_040659878.2 → XP_040515812.1  protein DENND6B isoform X5

      UniProtKB/TrEMBL
      A0A8V0XL11
      Conserved Domains (1) summary
      cl11519
      Location:31 → 191
      DENN; DENN (AEX-3) domain

    3. XM_046909578.1 → XP_046765534.1  protein DENND6B isoform X5

      UniProtKB/TrEMBL
      A0A8V0XL11

    4. XM_040659875.2 → XP_040515809.1  protein DENND6B isoform X2

      UniProtKB/TrEMBL
      A0A8V0XL11
      Conserved Domains (1) summary
      cl11519
      Location:138 → 298
      DENN; DENN (AEX-3) domain

    5. XM_040659876.2 → XP_040515810.1  protein DENND6B isoform X3

      UniProtKB/TrEMBL
      A0A8V0XL11
      Conserved Domains (1) summary
      cl11519
      Location:138 → 325
      DENN; DENN (AEX-3) domain

    6. XM_040659877.2 → XP_040515811.1  protein DENND6B isoform X4

      UniProtKB/TrEMBL
      A0A8V0XL11
      Conserved Domains (1) summary
      cl11519
      Location:138 → 325
      DENN; DENN (AEX-3) domain

    RNA

    1. XR_005844613.2 RNA Sequence

    2. XR_005844614.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials