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    EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 [ Gallus gallus (chicken) ]

    Gene ID: 420740, updated on 3-Dec-2024

    Summary

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    Symbol
    EEPD1provided by CGNC
    Full Name
    endonuclease/exonuclease/phosphatase family domain containing 1provided by CGNC
    Primary source
    CGNC:51332
    See related
    Ensembl:ENSGALG00010018832
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See EEPD1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (46713749..46778870, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (46761839..46827067, complement)

    Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene anillin actin binding protein Neighboring gene KIAA0895 Neighboring gene septin 7 Neighboring gene uncharacterized LOC101749468

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    endonuclease/exonuclease/phosphatase family domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      46713749..46778870 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046938127.1 → XP_046794083.1  endonuclease/exonuclease/phosphatase family domain-containing protein 1

      UniProtKB/TrEMBL
      A0A8V0Z1M2, A0A8V0Z915

    2. XM_418838.7 → XP_418838.3  endonuclease/exonuclease/phosphatase family domain-containing protein 1

      UniProtKB/TrEMBL
      A0A8V0Z1M2, A0A8V0Z915
      Related
      ENSGALP00010027121.1, ENSGALT00010045459.1
      Conserved Domains (2) summary
      cd10283
      Location:253 → 528
      MnuA_DNase1-like; Mycoplasma pulmonis MnuA nuclease-like
      COG1555
      Location:43 → 187
      ComEA; DNA uptake protein ComE and related DNA-binding proteins [Replication, recombination and repair]

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      46761839..46827067 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046912529.1 → XP_046768485.1  endonuclease/exonuclease/phosphatase family domain-containing protein 1

      UniProtKB/TrEMBL
      A0A8V0Z1M2

    2. XM_040662623.2 → XP_040518557.1  endonuclease/exonuclease/phosphatase family domain-containing protein 1

      UniProtKB/TrEMBL
      A0A8V0Z1M2
      Conserved Domains (2) summary
      cd10283
      Location:253 → 528
      MnuA_DNase1-like; Mycoplasma pulmonis MnuA nuclease-like
      COG1555
      Location:43 → 187
      ComEA; DNA uptake protein ComE and related DNA-binding proteins [Replication, recombination and repair]
    Nucleotide Protein
    Heading Accession and Version

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