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    TNFRSF13B TNF receptor superfamily member 13B [ Gallus gallus (chicken) ]

    Gene ID: 770275, updated on 3-Dec-2024

    Summary

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    Symbol
    TNFRSF13Bprovided by CGNC
    Full Name
    TNF receptor superfamily member 13Bprovided by CGNC
    Primary source
    CGNC:17053
    See related
    Ensembl:ENSGALG00010021671
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See TNFRSF13B in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 14 NC_052545.1 (4659263..4663866, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 14 NC_052586.1 (4653917..4658504, complement)

    Chromosome 14 - NC_052545.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC416500 Neighboring gene ubiquitin specific peptidase 22 Neighboring gene myosin phosphatase Rho interacting protein Neighboring gene phospholipase D family member 6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The BAFF-Interacting receptors of chickens. Reddy SK, et al. Dev Comp Immunol, 2008. PMID 18395254
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tumor necrosis factor receptor superfamily member 13B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001097537.1 → NP_001091006.1  tumor necrosis factor receptor superfamily member 13B

      See identical proteins and their annotated locations for NP_001091006.1

      Status: PROVISIONAL

      Source sequence(s)
      AM492777
      UniProtKB/TrEMBL
      A0A8V0ZL79, A4Q912
      Conserved Domains (2) summary
      cd00185
      Location:14 → 66
      TNFRSF; CRD1 [structural motif]
      cl22855
      Location:14 → 208
      TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052545.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      4659263..4663866 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015294252.4 → XP_015149738.2  tumor necrosis factor receptor superfamily member 13B isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZL79, A4Q912
      Conserved Domains (2) summary
      cd00185
      Location:14 → 66
      TNFRSF; CRD1 [structural motif]
      cl22855
      Location:14 → 208
      TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)

    2. XM_015294251.4 → XP_015149737.2  tumor necrosis factor receptor superfamily member 13B isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZL79, A4Q912
      Related
      ENSGALP00010031547.1, ENSGALT00010052641.1
      Conserved Domains (2) summary
      cd00185
      Location:14 → 66
      TNFRSF; CRD1 [structural motif]
      cl22855
      Location:14 → 208
      TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052586.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      4653917..4658504 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046927558.1 → XP_046783514.1  tumor necrosis factor receptor superfamily member 13B isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZL79, A4Q912

    2. XM_046927556.1 → XP_046783512.1  tumor necrosis factor receptor superfamily member 13B isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZL79, A4Q912

    3. XM_046927557.1 → XP_046783513.1  tumor necrosis factor receptor superfamily member 13B isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZL79, A4Q912
    Nucleotide Protein Strain
    Heading Accession and Version

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