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    SRSF11 serine and arginine rich splicing factor 11 [ Gallus gallus (chicken) ]

    Gene ID: 424714, updated on 17-Aug-2024

    Summary

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    Symbol
    SRSF11provided by CGNC
    Full Name
    serine and arginine rich splicing factor 11provided by CGNC
    Primary source
    CGNC:8594
    See related
    Ensembl:ENSGALG00010023693
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    SFRS11
    Orthologs
    human mouse all
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    Genomic context

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    See SRSF11 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 8 NC_052539.1 (28693446..28711951)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 8 NC_052580.1 (28705502..28724041)

    Chromosome 8 - NC_052539.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 7 Neighboring gene leucine rich repeat containing 40 Neighboring gene ankyrin repeat domain 13C Neighboring gene cystathionine gamma-lyase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA splicing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine/arginine-rich splicing factor 11
    Names
    splicing factor, arginine/serine-rich 11

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001031296.2 → NP_001026467.1  serine/arginine-rich splicing factor 11 isoform 2

      See identical proteins and their annotated locations for NP_001026467.1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000239
      UniProtKB/TrEMBL
      F1NWC7, Q5ZJ42
      Related
      ENSGALP00010035048.1, ENSGALT00010057741.1
      Conserved Domains (1) summary
      cd12518
      Location:8 → 87
      RRM_SRSF11; RNA recognition motif (RRM) found in serine/arginine-rich splicing factor 11 (SRSF11) and similar proteins

    2. NM_001397287.1 → NP_001384216.1  serine/arginine-rich splicing factor 11 isoform 1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000239
      UniProtKB/TrEMBL
      A0A8V1A1H3
      Related
      ENSGALP00010035044.1, ENSGALT00010057737.1
      Conserved Domains (1) summary
      smart00360
      Location:8 → 81
      RRM; RNA recognition motif

    3. NM_001397288.1 → NP_001384217.1  serine/arginine-rich splicing factor 11 isoform 1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000239
      UniProtKB/TrEMBL
      A0A8V1A1H3
      Conserved Domains (1) summary
      smart00360
      Location:8 → 81
      RRM; RNA recognition motif

    4. NM_001397289.1 → NP_001384218.1  serine/arginine-rich splicing factor 11 isoform 2

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000239
      UniProtKB/TrEMBL
      F1NWC7, Q5ZJ42
      Conserved Domains (1) summary
      cd12518
      Location:8 → 87
      RRM_SRSF11; RNA recognition motif (RRM) found in serine/arginine-rich splicing factor 11 (SRSF11) and similar proteins

    5. NM_001397290.1 → NP_001384219.1  serine/arginine-rich splicing factor 11 isoform 3

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000239
      Conserved Domains (1) summary
      smart00360
      Location:8 → 81
      RRM; RNA recognition motif

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052539.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      28693446..28711951
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046944543.1 → XP_046800499.1  serine/arginine-rich splicing factor 11 isoform X2

    2. XM_040704704.2 → XP_040560638.1  serine/arginine-rich splicing factor 11 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZW00
      Related
      ENSGALP00010035042.1, ENSGALT00010057733.1

    3. XM_040704702.2 → XP_040560636.1  serine/arginine-rich splicing factor 11 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZW00

    4. XM_040704706.2 → XP_040560640.1  serine/arginine-rich splicing factor 11 isoform X2

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052580.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      28705502..28724041
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046922903.1 → XP_046778859.1  serine/arginine-rich splicing factor 11 isoform X2

    2. XM_046922902.1 → XP_046778858.1  serine/arginine-rich splicing factor 11 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZW00
    Nucleotide Protein Strain
    Heading Accession and Version

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