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    B4GALT1 beta-1,4-galactosyltransferase 1 [ Gallus gallus (chicken) ]

    Gene ID: 396121, updated on 3-Dec-2024

    Summary

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    Official Symbol
    B4GALT1provided by CGNC
    Official Full Name
    beta-1,4-galactosyltransferase 1provided by CGNC
    Primary source
    CGNC:1437
    See related
    Ensembl:ENSGALG00010009486
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    CKI
    Orthologs
    human mouse all
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    Genomic context

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    See B4GALT1 in Genome Data Viewer
    Location:
    chromosome: Z
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (71203368..71222646, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (71203368..71222646, complement)

    Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene transfer RNA isoleucine (anticodon UAU) Neighboring gene aprataxin Neighboring gene DnaJ heat shock protein family (Hsp40) member A1 Neighboring gene DNA replication regulator and spliceosomal factor Neighboring gene uncharacterized LOC121108344 Neighboring gene serine peptidase inhibitor, Kazal type 4 Neighboring gene hemogen

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cytoskeletal protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein N-linked glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    beta-1,4-galactosyltransferase 1
    Names
    UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1
    NP_990533.1
    XP_015136078.1
    XP_046790801.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_205202.2 → NP_990533.1  beta-1,4-galactosyltransferase 1

      See identical proteins and their annotated locations for NP_990533.1

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000096
      UniProtKB/TrEMBL
      F1NNJ4, Q92074
      Related
      ENSGALP00010013075.1, ENSGALT00010022655.1
      Conserved Domains (1) summary
      cd00899
      Location:139 → 356
      b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      71203368..71222646 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015280592.4 → XP_015136078.1  beta-1,4-galactosyltransferase 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y697
      Related
      ENSGALP00010013071.1, ENSGALT00010022651.1
      Conserved Domains (2) summary
      cd00899
      Location:147 → 364
      b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
      COG1215
      Location:148 → 299
      BcsA; Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      71203368..71222646 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046934845.1 → XP_046790801.1  beta-1,4-galactosyltransferase 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y697
    Nucleotide Protein
    Heading Accession and Version

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