STRN striatin [Gallus gallus (chicken)] - Gene

Summary

Symbol: STRNprovided by CGNC
Full Name: striatinprovided by CGNC
Primary source: CGNC:8034
See related: Ensembl:ENSGALG00010007441
Gene type: protein coding
RefSeq status: MODEL
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 3

Exon count:: 19

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	3	NC_052534.1 (31752734..31817953)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	3	NC_052575.1 (31679768..31745080)

Chromosome 3 - NC_052534.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables armadillo repeat domain binding	IEA Inferred from Electronic Annotation more info	PubMed
enables calmodulin binding	IEA Inferred from Electronic Annotation more info	PubMed
enables protein phosphatase 2A binding	IEA Inferred from Electronic Annotation more info	PubMed
enables protein-containing complex binding	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in dendrite	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: striatin

Names: striatin, calmodulin binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

31752734..31817953

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_004935418.5 → XP_004935475.2 striatin isoform X1

UniProtKB/TrEMBL

A0A8V0XSZ1

Related

ENSGALP00010009812.1, ENSGALT00010017749.1

Conserved Domains (4) summary

COG2319
Location:507 → 822

WD40; WD40 repeat [General function prediction only]

cd00200
Location:504 → 828

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

pfam08232
Location:69 → 194

Striatin; Striatin family

sd00039
Location:518 → 563

7WD40; WD40 repeat [structural motif]
XM_004935419.5 → XP_004935476.2 striatin isoform X2

UniProtKB/TrEMBL

A0A8V0XSZ1

Conserved Domains (4) summary

COG2319
Location:497 → 812

WD40; WD40 repeat [General function prediction only]

cd00200
Location:494 → 818

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

pfam08232
Location:69 → 194

Striatin; Striatin family

sd00039
Location:508 → 553

7WD40; WD40 repeat [structural motif]
XM_419519.8 → XP_419519.5 striatin isoform X3

UniProtKB/TrEMBL

A0A8V0XNP3, A0A8V0Y0R2

Related

ENSGALP00010009814.1, ENSGALT00010017756.1

Conserved Domains (4) summary

COG2319
Location:478 → 793

WD40; WD40 repeat [General function prediction only]

cd00200
Location:475 → 799

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

pfam08232
Location:69 → 194

Striatin; Striatin family

sd00039
Location:489 → 534

7WD40; WD40 repeat [structural motif]
XM_040698554.2 → XP_040554488.1 striatin isoform X4

UniProtKB/TrEMBL

A0A8V0XNP3

Conserved Domains (2) summary

cd00200
Location:465 → 789

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

sd00039
Location:479 → 524

7WD40; WD40 repeat [structural motif]
XM_004935421.5 → XP_004935478.2 striatin isoform X5

UniProtKB/TrEMBL

A0A8V0XNP3, A0A8V0XUY6

Related

ENSGALP00010009815.1, ENSGALT00010017758.1

Conserved Domains (4) summary

COG2319
Location:441 → 756

WD40; WD40 repeat [General function prediction only]

cd00200
Location:438 → 762

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

pfam08232
Location:69 → 194

Striatin; Striatin family

sd00039
Location:452 → 497

7WD40; WD40 repeat [structural motif]
XM_040698555.2 → XP_040554489.1 striatin isoform X6

UniProtKB/TrEMBL

A0A8V0XNP3

Conserved Domains (2) summary

cd00200
Location:428 → 752

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

sd00039
Location:442 → 487

7WD40; WD40 repeat [structural motif]

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Range

31679768..31745080

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_040668790.2 → XP_040524724.1 striatin isoform X1

UniProtKB/TrEMBL

A0A8V0XSZ1

Conserved Domains (2) summary

cd00200
Location:504 → 828

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

sd00039
Location:518 → 563

7WD40; WD40 repeat [structural motif]
XM_040668792.2 → XP_040524726.1 striatin isoform X2

UniProtKB/TrEMBL

A0A8V0XSZ1

Conserved Domains (2) summary

cd00200
Location:494 → 818

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

sd00039
Location:508 → 553

7WD40; WD40 repeat [structural motif]
XM_040668793.2 → XP_040524727.1 striatin isoform X3

UniProtKB/TrEMBL

A0A8V0XNP3

Conserved Domains (2) summary

cd00200
Location:475 → 799

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

sd00039
Location:489 → 534

7WD40; WD40 repeat [structural motif]
XM_040668794.2 → XP_040524728.1 striatin isoform X4

UniProtKB/TrEMBL

A0A8V0XNP3

Conserved Domains (2) summary

cd00200
Location:465 → 789

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

sd00039
Location:479 → 524

7WD40; WD40 repeat [structural motif]
XM_040668795.2 → XP_040524729.1 striatin isoform X5

UniProtKB/TrEMBL

A0A8V0XNP3

Conserved Domains (2) summary

cd00200
Location:438 → 762

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

sd00039
Location:452 → 497

7WD40; WD40 repeat [structural motif]
XM_040668796.2 → XP_040524730.1 striatin isoform X6

UniProtKB/TrEMBL

A0A8V0XNP3

Conserved Domains (2) summary

cd00200
Location:428 → 752

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

sd00039
Location:442 → 487

7WD40; WD40 repeat [structural motif]