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    CISD2 CDGSH iron sulfur domain 2 [ Gallus gallus (chicken) ]

    Gene ID: 422714, updated on 17-Aug-2024

    Summary

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    Symbol
    CISD2provided by CGNC
    Full Name
    CDGSH iron sulfur domain 2provided by CGNC
    Primary source
    CGNC:66442
    See related
    Ensembl:ENSGALG00010016900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    ZCD2
    Orthologs
    human mouse all
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    Genomic context

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    See CISD2 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (60463197..60469591)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (60460187..60466594)

    Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121110726 Neighboring gene nuclear factor kappa B subunit 1 Neighboring gene mannosidase beta Neighboring gene ubiquitin conjugating enzyme E2 D3 Neighboring gene solute carrier family 9 member B2 Neighboring gene 3-hydroxybutyrate dehydrogenase 2 Neighboring gene centromere protein E

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 2 iron, 2 sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in autophagy of mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of autophagy IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrial outer membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CDGSH iron sulfur domain-containing protein 2; CDGSH iron-sulfur domain-containing protein 2
    Names
    zinc finger, CDGSH-type domain 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      60463197..60469591
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_420668.8 → XP_420668.1  CDGSH iron-sulfur domain-containing protein 2

      See identical proteins and their annotated locations for XP_420668.1

      UniProtKB/TrEMBL
      A0A8V0YYM2, R4GLS1
      Related
      ENSGALP00010023752.1, ENSGALT00010040788.1
      Conserved Domains (2) summary
      smart00704
      Location:81 → 118
      ZnF_CDGSH; CDGSH-type zinc finger. Function unknown
      pfam10660
      Location:3 → 66
      MitoNEET_N; Iron-containing outer mitochondrial membrane protein N-terminus

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      60460187..60466594
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040671238.2 → XP_040527172.1  CDGSH iron-sulfur domain-containing protein 2

      UniProtKB/TrEMBL
      A0A8V0YYM2, R4GLS1
      Conserved Domains (2) summary
      smart00704
      Location:81 → 118
      ZnF_CDGSH; CDGSH-type zinc finger. Function unknown
      pfam10660
      Location:3 → 66
      MitoNEET_N; Iron-containing outer mitochondrial membrane protein N-terminus
    Nucleotide Protein Strain
    Heading Accession and Version

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