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    CHD7 chromodomain helicase DNA binding protein 7 [ Gallus gallus (chicken) ]

    Gene ID: 421140, updated on 3-Dec-2024

    Summary

    Symbol
    CHD7provided by CGNC
    Full Name
    chromodomain helicase DNA binding protein 7provided by CGNC
    Primary source
    CGNC:51424
    See related
    Ensembl:ENSGALG00010002626
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    CHD-7
    Orthologs
    NEW
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    Genomic context

    See CHD7 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    43
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (112578530..112708402)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (112584597..112714244)

    Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121113134 Neighboring gene RAB2A, member RAS oncogene family Neighboring gene uncharacterized LOC107052732 Neighboring gene microRNA 1557 Neighboring gene uncharacterized LOC101750226 Neighboring gene uncharacterized LOC107052736

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables ATP-dependent chromatin remodeler activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    chromodomain-helicase-DNA-binding protein 7
    Names
    ATP-dependent helicase CHD7
    NP_001071054.1
    XP_046767573.1
    XP_046767574.1
    XP_046767575.1
    XP_046767576.1
    XP_046767577.1
    XP_046767578.1
    XP_046767579.1
    XP_046767580.1
    XP_046767581.1
    XP_046781543.1
    XP_046781550.1
    XP_046781560.1
    XP_046781566.1
    XP_046781572.1
    XP_046781583.1
    XP_046781592.1
    XP_046781600.1
    XP_046781605.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001077586.4NP_001071054.1  chromodomain-helicase-DNA-binding protein 7

      See identical proteins and their annotated locations for NP_001071054.1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000043
      UniProtKB/Swiss-Prot
      Q06A37
      UniProtKB/TrEMBL
      A0A8V0XDW9
      Conserved Domains (9) summary
      smart00592
      Location:26442688
      BRK; domain in transcription and CHROMO domain helicases
      cd00024
      Location:802863
      CHROMO; Chromatin organization modifier (chromo) domain is a conserved region of around 50 amino acids found in a variety of chromosomal proteins, which appear to play a role in the functional organization of the eukaryotic nucleus. Experimental evidence ...
      cd00046
      Location:9881137
      DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
      pfam08430
      Location:309426
      Forkhead_N; Forkhead N-terminal region
      pfam09606
      Location:23425
      Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
      pfam00176
      Location:9721259
      SNF2_N; SNF2 family N-terminal domain
      pfam00271
      Location:12911405
      Helicase_C; Helicase conserved C-terminal domain
      pfam00385
      Location:884936
      Chromo; Chromo (CHRromatin Organization MOdifier) domain
      pfam07533
      Location:25662606
      BRK; BRK domain

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      112578530..112708402
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046925604.1XP_046781560.1  chromodomain-helicase-DNA-binding protein 7 isoform X1

      UniProtKB/Swiss-Prot
      Q06A37
      UniProtKB/TrEMBL
      A0A8V0XDW9
    2. XM_046925594.1XP_046781550.1  chromodomain-helicase-DNA-binding protein 7 isoform X1

      UniProtKB/Swiss-Prot
      Q06A37
      UniProtKB/TrEMBL
      A0A8V0XDW9
    3. XM_046925610.1XP_046781566.1  chromodomain-helicase-DNA-binding protein 7 isoform X1

      UniProtKB/Swiss-Prot
      Q06A37
      UniProtKB/TrEMBL
      A0A8V0XDW9
    4. XM_046925587.1XP_046781543.1  chromodomain-helicase-DNA-binding protein 7 isoform X1

      UniProtKB/Swiss-Prot
      Q06A37
      UniProtKB/TrEMBL
      A0A8V0XDW9
      Related
      ENSGALP00010003807.1, ENSGALT00010006099.1
    5. XM_046925636.1XP_046781592.1  chromodomain-helicase-DNA-binding protein 7 isoform X3

      UniProtKB/TrEMBL
      A0A8V0XDW9
    6. XM_046925644.1XP_046781600.1  chromodomain-helicase-DNA-binding protein 7 isoform X4

      UniProtKB/TrEMBL
      A0A8V0XDW9
    7. XM_046925627.1XP_046781583.1  chromodomain-helicase-DNA-binding protein 7 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XDW9
    8. XM_046925616.1XP_046781572.1  chromodomain-helicase-DNA-binding protein 7 isoform X1

      UniProtKB/Swiss-Prot
      Q06A37
      UniProtKB/TrEMBL
      A0A8V0XDW9
    9. XM_046925649.1XP_046781605.1  chromodomain-helicase-DNA-binding protein 7 isoform X5

      UniProtKB/TrEMBL
      A0A8V0XDW9

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      112584597..112714244
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046911619.1XP_046767575.1  chromodomain-helicase-DNA-binding protein 7 isoform X1

      UniProtKB/Swiss-Prot
      Q06A37
      UniProtKB/TrEMBL
      A0A8V0XDW9
    2. XM_046911618.1XP_046767574.1  chromodomain-helicase-DNA-binding protein 7 isoform X1

      UniProtKB/Swiss-Prot
      Q06A37
      UniProtKB/TrEMBL
      A0A8V0XDW9
    3. XM_046911620.1XP_046767576.1  chromodomain-helicase-DNA-binding protein 7 isoform X1

      UniProtKB/Swiss-Prot
      Q06A37
      UniProtKB/TrEMBL
      A0A8V0XDW9
    4. XM_046911617.1XP_046767573.1  chromodomain-helicase-DNA-binding protein 7 isoform X1

      UniProtKB/Swiss-Prot
      Q06A37
      UniProtKB/TrEMBL
      A0A8V0XDW9
    5. XM_046911623.1XP_046767579.1  chromodomain-helicase-DNA-binding protein 7 isoform X3

      UniProtKB/TrEMBL
      A0A8V0XDW9
    6. XM_046911624.1XP_046767580.1  chromodomain-helicase-DNA-binding protein 7 isoform X4

      UniProtKB/TrEMBL
      A0A8V0XDW9
    7. XM_046911622.1XP_046767578.1  chromodomain-helicase-DNA-binding protein 7 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XDW9
    8. XM_046911621.1XP_046767577.1  chromodomain-helicase-DNA-binding protein 7 isoform X1

      UniProtKB/Swiss-Prot
      Q06A37
      UniProtKB/TrEMBL
      A0A8V0XDW9
    9. XM_046911625.1XP_046767581.1  chromodomain-helicase-DNA-binding protein 7 isoform X5

      UniProtKB/TrEMBL
      A0A8V0XDW9