U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    DENR density regulated re-initiation and release factor [ Gallus gallus (chicken) ]

    Gene ID: 771794, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Symbol
    DENRprovided by CGNC
    Full Name
    density regulated re-initiation and release factorprovided by CGNC
    Primary source
    CGNC:2776
    See related
    Ensembl:ENSGALG00010025026
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See DENR in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 15 NC_052546.1 (5285460..5292859, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 15 NC_052587.1 (5296218..5303566, complement)

    Chromosome 15 - NC_052546.1Genomic Context describing neighboring genes Neighboring gene VPS37B subunit of ESCRT-I Neighboring gene huntingtin interacting protein 1 related Neighboring gene uncharacterized LOC121106886 Neighboring gene uncharacterized LOC124417222 Neighboring gene GPN-loop GTPase 3 Neighboring gene actin related protein 2/3 complex subunit 3 Neighboring gene anaphase promoting complex subunit 7 Neighboring gene ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation initiation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in formation of translation preinitiation complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in translation reinitiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    density-regulated protein
    Names
    DRP

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001079505.2 → NP_001072973.1  density-regulated protein

      See identical proteins and their annotated locations for NP_001072973.1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000260
      UniProtKB/Swiss-Prot
      Q5ZJ39
      Related
      ENSGALP00010037806.1, ENSGALT00010061105.1
      Conserved Domains (1) summary
      TIGR01159
      Location:28 → 193
      DRP1; density-regulated protein DRP1

    2. NM_001396389.1 → NP_001383318.1  density-regulated protein

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000260
      UniProtKB/Swiss-Prot
      Q5ZJ39
      Conserved Domains (1) summary
      TIGR01159
      Location:28 → 193
      DRP1; density-regulated protein DRP1

    RNA

    1. NR_173338.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000260

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052546.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      5285460..5292859 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015275344.3 → XP_015130830.2  density-regulated protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A8V4
      Related
      ENSGALP00010037803.1, ENSGALT00010061100.1
      Conserved Domains (1) summary
      TIGR01159
      Location:40 → 205
      DRP1; density-regulated protein DRP1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052587.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      5296218..5303566 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046928269.1 → XP_046784225.1  density-regulated protein isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5ZJ39.1 GenPept UniProtKB/Swiss-Prot:Q5ZJ39

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials