U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    HHLA2 HHLA2 member of B7 family [ Gallus gallus (chicken) ]

    Gene ID: 107054979, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    HHLA2provided by CGNC
    Official Full Name
    HHLA2 member of B7 familyprovided by CGNC
    Primary source
    CGNC:62753
    See related
    Ensembl:ENSGALG00010004835
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See HHLA2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (87696608..87731926)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (87737768..87773065)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene inositol 1, 4, 5-trisphosphate receptor-interacting protein 3S Neighboring gene CD47 molecule Neighboring gene intraflagellar transport 57 Neighboring gene myosin, heavy chain 15 Neighboring gene uncharacterized LOC121109109 Neighboring gene cellular inhibitor of PP2A Neighboring gene inositol 1, 4, 5-trisphosphate receptor-interacting protein 3J

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in T cell costimulation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell surface receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to lipopolysaccharide IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of T cell proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of T cell proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in external side of plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    HERV-H LTR-associating protein 2
    Names
    HERV-H LTR-associating 2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      87696608..87731926
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015297471.4 → XP_015152957.2  HERV-H LTR-associating protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XDZ2, A0A8V0XKQ2
      Conserved Domains (1) summary
      smart00409
      Location:35 → 126
      IG; Immunoglobulin

    2. XM_015297466.4 → XP_015152952.2  HERV-H LTR-associating protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XDZ2, A0A8V0XKQ2
      Related
      ENSGALP00010006352.1, ENSGALT00010011263.1
      Conserved Domains (1) summary
      smart00409
      Location:35 → 126
      IG; Immunoglobulin

    3. XM_015297498.4 → XP_015152984.2  HERV-H LTR-associating protein 2 isoform X5

      UniProtKB/TrEMBL
      A0A8V0XKP2
      Related
      ENSGALP00010006354.1, ENSGALT00010011267.1
      Conserved Domains (1) summary
      smart00409
      Location:35 → 126
      IG; Immunoglobulin

    4. XM_015297484.4 → XP_015152970.2  HERV-H LTR-associating protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XDZ2, A0A8V0XKQ2
      Conserved Domains (1) summary
      smart00409
      Location:35 → 126
      IG; Immunoglobulin

    5. XM_046914739.1 → XP_046770695.1  HERV-H LTR-associating protein 2 isoform X5

      UniProtKB/TrEMBL
      A0A8V0XKP2

    6. XM_040666277.2 → XP_040522211.1  HERV-H LTR-associating protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XDZ2, A0A8V0XKQ2
      Conserved Domains (1) summary
      smart00409
      Location:35 → 126
      IG; Immunoglobulin

    7. XM_046914723.1 → XP_046770679.1  HERV-H LTR-associating protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XDZ2, A0A8V0XKQ2

    8. XM_040666280.2 → XP_040522214.1  HERV-H LTR-associating protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XI25
      Conserved Domains (3) summary
      smart00409
      Location:216 → 311
      IG; Immunoglobulin
      cd00096
      Location:28 → 31
      Ig; Ig strand A' [structural motif]
      cl11960
      Location:24 → 126
      Ig; Immunoglobulin domain

    9. XM_015297489.4 → XP_015152975.1  HERV-H LTR-associating protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XI25
      Related
      ENSGALP00010006348.1, ENSGALT00010011252.1
      Conserved Domains (3) summary
      smart00409
      Location:216 → 311
      IG; Immunoglobulin
      cd00096
      Location:28 → 31
      Ig; Ig strand A' [structural motif]
      cl11960
      Location:24 → 126
      Ig; Immunoglobulin domain

    10. XM_015297495.4 → XP_015152981.1  HERV-H LTR-associating protein 2 isoform X3

      UniProtKB/TrEMBL
      A0A8V0XKQ2
      Conserved Domains (3) summary
      smart00409
      Location:216 → 311
      IG; Immunoglobulin
      cd00096
      Location:28 → 31
      Ig; Ig strand A' [structural motif]
      cl11960
      Location:24 → 126
      Ig; Immunoglobulin domain

    11. XM_040666283.2 → XP_040522217.1  HERV-H LTR-associating protein 2 isoform X4

      UniProtKB/TrEMBL
      A0A8V0XKN8, A0A8V0XKQ2
      Related
      ENSGALP00010006349.1, ENSGALT00010011255.1
      Conserved Domains (1) summary
      smart00409
      Location:35 → 126
      IG; Immunoglobulin

    12. XM_025144239.3 → XP_025000007.1  HERV-H LTR-associating protein 2 isoform X6

      Conserved Domains (2) summary
      cd00096
      Location:28 → 31
      Ig; Ig strand A' [structural motif]
      cl11960
      Location:24 → 126
      Ig; Immunoglobulin domain

    13. XM_025144230.3 → XP_024999998.1  HERV-H LTR-associating protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XI25
      Conserved Domains (3) summary
      smart00409
      Location:216 → 311
      IG; Immunoglobulin
      cd00096
      Location:28 → 31
      Ig; Ig strand A' [structural motif]
      cl11960
      Location:24 → 126
      Ig; Immunoglobulin domain

    14. XM_025144237.3 → XP_025000005.1  HERV-H LTR-associating protein 2 isoform X3

      UniProtKB/TrEMBL
      A0A8V0XKQ2
      Conserved Domains (3) summary
      smart00409
      Location:216 → 311
      IG; Immunoglobulin
      cd00096
      Location:28 → 31
      Ig; Ig strand A' [structural motif]
      cl11960
      Location:24 → 126
      Ig; Immunoglobulin domain

    15. XM_046914730.1 → XP_046770686.1  HERV-H LTR-associating protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XI25

    16. XM_040666284.2 → XP_040522218.1  HERV-H LTR-associating protein 2 isoform X7

      UniProtKB/TrEMBL
      A0A8V0XQD2
      Conserved Domains (1) summary
      smart00409
      Location:35 → 126
      IG; Immunoglobulin

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      87737768..87773065
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040658170.2 → XP_040514104.1  HERV-H LTR-associating protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XKQ2
      Conserved Domains (3) summary
      smart00409
      Location:216 → 311
      IG; Immunoglobulin
      cd00096
      Location:28 → 31
      Ig; Ig strand A' [structural motif]
      cl11960
      Location:24 → 126
      Ig; Immunoglobulin domain

    2. XM_046909036.1 → XP_046764992.1  HERV-H LTR-associating protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XKQ2

    3. XM_046909037.1 → XP_046764993.1  HERV-H LTR-associating protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XI25

    4. XM_046909033.1 → XP_046764989.1  HERV-H LTR-associating protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XKQ2

    5. XM_040658171.2 → XP_040514105.1  HERV-H LTR-associating protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XKQ2
      Conserved Domains (3) summary
      smart00409
      Location:216 → 311
      IG; Immunoglobulin
      cd00096
      Location:28 → 31
      Ig; Ig strand A' [structural motif]
      cl11960
      Location:24 → 126
      Ig; Immunoglobulin domain

    6. XM_046909034.1 → XP_046764990.1  HERV-H LTR-associating protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XKQ2

    7. XM_040658174.2 → XP_040514108.1  HERV-H LTR-associating protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XKQ2
      Conserved Domains (3) summary
      smart00409
      Location:216 → 311
      IG; Immunoglobulin
      cd00096
      Location:28 → 31
      Ig; Ig strand A' [structural motif]
      cl11960
      Location:24 → 126
      Ig; Immunoglobulin domain

    8. XM_040658172.2 → XP_040514106.1  HERV-H LTR-associating protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XKQ2
      Conserved Domains (3) summary
      smart00409
      Location:216 → 311
      IG; Immunoglobulin
      cd00096
      Location:28 → 31
      Ig; Ig strand A' [structural motif]
      cl11960
      Location:24 → 126
      Ig; Immunoglobulin domain

    9. XM_046909035.1 → XP_046764991.1  HERV-H LTR-associating protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XKQ2

    10. XM_040658173.2 → XP_040514107.1  HERV-H LTR-associating protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XKQ2
      Conserved Domains (3) summary
      smart00409
      Location:216 → 311
      IG; Immunoglobulin
      cd00096
      Location:28 → 31
      Ig; Ig strand A' [structural motif]
      cl11960
      Location:24 → 126
      Ig; Immunoglobulin domain

    11. XM_040658168.2 → XP_040514102.1  HERV-H LTR-associating protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XKQ2
      Conserved Domains (3) summary
      smart00409
      Location:216 → 311
      IG; Immunoglobulin
      cd00096
      Location:28 → 31
      Ig; Ig strand A' [structural motif]
      cl11960
      Location:24 → 126
      Ig; Immunoglobulin domain

    12. XM_040658182.2 → XP_040514116.1  HERV-H LTR-associating protein 2 isoform X5

      Conserved Domains (1) summary
      smart00409
      Location:35 → 126
      IG; Immunoglobulin

    13. XM_040658169.2 → XP_040514103.1  HERV-H LTR-associating protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XKQ2
      Conserved Domains (3) summary
      smart00409
      Location:216 → 311
      IG; Immunoglobulin
      cd00096
      Location:28 → 31
      Ig; Ig strand A' [structural motif]
      cl11960
      Location:24 → 126
      Ig; Immunoglobulin domain

    14. XM_046909041.1 → XP_046764997.1  HERV-H LTR-associating protein 2 isoform X5

    15. XM_046909038.1 → XP_046764994.1  HERV-H LTR-associating protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XI25

    16. XM_046909040.1 → XP_046764996.1  HERV-H LTR-associating protein 2 isoform X3

      UniProtKB/TrEMBL
      A0A8V0XKQ2

    17. XM_040658178.2 → XP_040514112.1  HERV-H LTR-associating protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XI25
      Conserved Domains (3) summary
      smart00409
      Location:216 → 311
      IG; Immunoglobulin
      cd00096
      Location:28 → 31
      Ig; Ig strand A' [structural motif]
      cl11960
      Location:24 → 126
      Ig; Immunoglobulin domain

    18. XM_040658176.2 → XP_040514110.1  HERV-H LTR-associating protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XI25
      Conserved Domains (3) summary
      smart00409
      Location:216 → 311
      IG; Immunoglobulin
      cd00096
      Location:28 → 31
      Ig; Ig strand A' [structural motif]
      cl11960
      Location:24 → 126
      Ig; Immunoglobulin domain

    19. XM_040658175.2 → XP_040514109.1  HERV-H LTR-associating protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XI25
      Conserved Domains (3) summary
      smart00409
      Location:216 → 311
      IG; Immunoglobulin
      cd00096
      Location:28 → 31
      Ig; Ig strand A' [structural motif]
      cl11960
      Location:24 → 126
      Ig; Immunoglobulin domain

    20. XM_040658179.2 → XP_040514113.1  HERV-H LTR-associating protein 2 isoform X3

      UniProtKB/TrEMBL
      A0A8V0XKQ2
      Conserved Domains (3) summary
      smart00409
      Location:216 → 311
      IG; Immunoglobulin
      cd00096
      Location:28 → 31
      Ig; Ig strand A' [structural motif]
      cl11960
      Location:24 → 126
      Ig; Immunoglobulin domain

    21. XM_040658181.2 → XP_040514115.1  HERV-H LTR-associating protein 2 isoform X4

      UniProtKB/TrEMBL
      A0A8V0XKN8, A0A8V0XKQ2
      Conserved Domains (1) summary
      smart00409
      Location:35 → 126
      IG; Immunoglobulin

    22. XM_040658183.2 → XP_040514117.1  HERV-H LTR-associating protein 2 isoform X6

      Conserved Domains (2) summary
      cd00096
      Location:28 → 31
      Ig; Ig strand A' [structural motif]
      cl11960
      Location:24 → 126
      Ig; Immunoglobulin domain

    23. XM_040658177.2 → XP_040514111.1  HERV-H LTR-associating protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XI25
      Conserved Domains (3) summary
      smart00409
      Location:216 → 311
      IG; Immunoglobulin
      cd00096
      Location:28 → 31
      Ig; Ig strand A' [structural motif]
      cl11960
      Location:24 → 126
      Ig; Immunoglobulin domain

    24. XM_040658180.2 → XP_040514114.1  HERV-H LTR-associating protein 2 isoform X3

      UniProtKB/TrEMBL
      A0A8V0XKQ2
      Conserved Domains (3) summary
      smart00409
      Location:216 → 311
      IG; Immunoglobulin
      cd00096
      Location:28 → 31
      Ig; Ig strand A' [structural motif]
      cl11960
      Location:24 → 126
      Ig; Immunoglobulin domain
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.