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    NARF nuclear prelamin A recognition factor [ Gallus gallus (chicken) ]

    Gene ID: 417341, updated on 3-Dec-2024

    Summary

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    Symbol
    NARFprovided by CGNC
    Full Name
    nuclear prelamin A recognition factorprovided by CGNC
    Primary source
    CGNC:1111
    See related
    Ensembl:ENSGALG00010029150
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See NARF in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 18 NC_052549.1 (4103064..4118751, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 18 NC_052590.1 (3707335..3723013, complement)

    Chromosome 18 - NC_052549.1Genomic Context describing neighboring genes Neighboring gene transfer RNA glutamine (anticodon CUG) Neighboring gene transfer RNA glutamine (anticodon UUG) Neighboring gene cytochrome b-245 chaperone 1 Neighboring gene hexosaminidase D Neighboring gene 2-oxoglutarate and iron dependent oxygenase domain containing 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables lamin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in lamin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear prelamin A recognition factor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052549.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      4103064..4118751 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004946090.5 → XP_004946147.1  nuclear prelamin A recognition factor

      See identical proteins and their annotated locations for XP_004946147.1

      UniProtKB/TrEMBL
      A0A8V1AIC0, E1BYV6
      Related
      ENSGALP00010043134.1, ENSGALT00010070443.1
      Conserved Domains (3) summary
      smart00902
      Location:402 → 448
      Fe_hyd_SSU; Iron hydrogenase small subunit
      TIGR02512
      Location:2 → 387
      FeFe_hydrog_A; [FeFe] hydrogenase, group A
      pfam02906
      Location:92 → 387
      Fe_hyd_lg_C; Iron only hydrogenase large subunit, C-terminal domain

    2. XM_415606.8 → XP_415606.3  nuclear prelamin A recognition factor

      See identical proteins and their annotated locations for XP_415606.3

      UniProtKB/TrEMBL
      A0A8V1AIC0, E1BYV6
      Conserved Domains (3) summary
      smart00902
      Location:402 → 448
      Fe_hyd_SSU; Iron hydrogenase small subunit
      TIGR02512
      Location:2 → 387
      FeFe_hydrog_A; [FeFe] hydrogenase, group A
      pfam02906
      Location:92 → 387
      Fe_hyd_lg_C; Iron only hydrogenase large subunit, C-terminal domain

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052590.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      3707335..3723013 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046929728.1 → XP_046785684.1  nuclear prelamin A recognition factor

      UniProtKB/TrEMBL
      A0A8V1AIC0, E1BYV6

    2. XM_046929727.1 → XP_046785683.1  nuclear prelamin A recognition factor

      UniProtKB/TrEMBL
      A0A8V1AIC0, E1BYV6
    Nucleotide Protein
    Heading Accession and Version

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