U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    RGNL regucalcin like [ Gallus gallus (chicken) ]

    Gene ID: 428008, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    RGNLprovided by CGNC
    Official Full Name
    regucalcin likeprovided by CGNC
    Primary source
    CGNC:53240
    See related
    Ensembl:ENSGALG00010002618
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    RGN
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See RGNL in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (130211814..130222240, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (130167533..130177954, complement)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene stromal antigen 3 Neighboring gene GTP binding protein 6 (putative) Neighboring gene phosphatidylinositol specific phospholipase C X domain containing 1 Neighboring gene regucalcin Neighboring gene jade family PHD finger 3 Neighboring gene uncharacterized LOC107051962

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables enzyme regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables gluconolactonase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in L-ascorbic acid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    regucalcin-like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      130211814..130222240 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040661866.1 → XP_040517800.1  regucalcin-like isoform X3

      UniProtKB/TrEMBL
      A0A8V0XHH5
      Related
      ENSGALP00010003778.1, ENSGALT00010006060.1
      Conserved Domains (1) summary
      COG3386
      Location:22 → 316
      YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]

    2. XM_015277746.3 → XP_015133232.2  regucalcin-like isoform X4

      UniProtKB/TrEMBL
      A0A8V0X6Q6, A0A8V0XAU8
      Related
      ENSGALP00010003777.1, ENSGALT00010006059.1
      Conserved Domains (1) summary
      COG3386
      Location:1 → 293
      YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]

    3. XM_015277744.4 → XP_015133230.2  regucalcin-like isoform X4

      UniProtKB/TrEMBL
      A0A8V0X6Q6, A0A8V0XAU8
      Related
      ENSGALP00010003776.1, ENSGALT00010006058.1
      Conserved Domains (1) summary
      COG3386
      Location:1 → 293
      YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]

    4. XM_015277743.4 → XP_015133229.2  regucalcin-like isoform X1

      UniProtKB/TrEMBL
      A0A8V0X6Q6
      Conserved Domains (1) summary
      COG3386
      Location:37 → 340
      YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]

    5. XM_004938455.5 → XP_004938512.3  regucalcin-like isoform X2

      UniProtKB/TrEMBL
      A0A8V0X6Q6
      Conserved Domains (1) summary
      COG3386
      Location:37 → 345
      YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]

    6. XM_040661865.1 → XP_040517799.1  regucalcin-like isoform X3

      UniProtKB/TrEMBL
      A0A8V0XHH5
      Conserved Domains (1) summary
      COG3386
      Location:22 → 316
      YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      130167533..130177954 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040661153.1 → XP_040517087.1  regucalcin-like isoform X3

      UniProtKB/TrEMBL
      A0A8V0XHH5
      Conserved Domains (1) summary
      COG3386
      Location:22 → 316
      YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]

    2. XM_040661155.1 → XP_040517089.1  regucalcin-like isoform X4

      UniProtKB/TrEMBL
      A0A8V0X6Q6, A0A8V0XAU8
      Conserved Domains (1) summary
      COG3386
      Location:1 → 293
      YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]

    3. XM_040661154.2 → XP_040517088.1  regucalcin-like isoform X4

      UniProtKB/TrEMBL
      A0A8V0X6Q6, A0A8V0XAU8
      Conserved Domains (1) summary
      COG3386
      Location:1 → 293
      YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]

    4. XM_040661150.2 → XP_040517084.1  regucalcin-like isoform X1

      UniProtKB/TrEMBL
      A0A8V0X6Q6
      Conserved Domains (1) summary
      COG3386
      Location:37 → 340
      YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]

    5. XM_040661151.2 → XP_040517085.1  regucalcin-like isoform X2

      UniProtKB/TrEMBL
      A0A8V0X6Q6
      Conserved Domains (1) summary
      COG3386
      Location:37 → 345
      YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]

    6. XM_040661152.1 → XP_040517086.1  regucalcin-like isoform X3

      UniProtKB/TrEMBL
      A0A8V0XHH5
      Conserved Domains (1) summary
      COG3386
      Location:22 → 316
      YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.