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    KCNN1 potassium calcium-activated channel subfamily N member 1 [ Gallus gallus (chicken) ]

    Gene ID: 429723, updated on 17-Aug-2024

    Summary

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    Symbol
    KCNN1provided by CGNC
    Full Name
    potassium calcium-activated channel subfamily N member 1provided by CGNC
    Primary source
    CGNC:53755
    See related
    Ensembl:ENSGALG00010028573
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See KCNN1 in Genome Data Viewer
    Location:
    chromosome: 28
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 28 NC_052559.1 (3794640..3805457)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 28 NC_052600.1 (3357174..3368030)

    Chromosome 28 - NC_052559.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124417441 Neighboring gene solute carrier family 5 member 5 Neighboring gene coiled-coil domain containing 124 Neighboring gene occludin/ELL domain containing 1 Neighboring gene occludin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables small conductance calcium-activated potassium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in potassium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuronal cell body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    small conductance calcium-activated potassium channel protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052559.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      3794640..3805457
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040653750.2 → XP_040509684.1  small conductance calcium-activated potassium channel protein 1 isoform X7

      Conserved Domains (1) summary
      smart01053
      Location:362 → 440
      CaMBD; Calmodulin binding domain

    2. XM_015300089.4 → XP_015155575.3  small conductance calcium-activated potassium channel protein 1 isoform X1

      Conserved Domains (1) summary
      smart01053
      Location:470 → 548
      CaMBD; Calmodulin binding domain

    3. XM_015300090.4 → XP_015155576.3  small conductance calcium-activated potassium channel protein 1 isoform X3

      Conserved Domains (1) summary
      smart01053
      Location:470 → 545
      CaMBD; Calmodulin binding domain

    4. XM_025144393.3 → XP_025000161.2  small conductance calcium-activated potassium channel protein 1 isoform X2

      Conserved Domains (1) summary
      smart01053
      Location:467 → 545
      CaMBD; Calmodulin binding domain

    5. XM_015300091.4 → XP_015155577.3  small conductance calcium-activated potassium channel protein 1 isoform X4

      Conserved Domains (1) summary
      smart01053
      Location:467 → 542
      CaMBD; Calmodulin binding domain

    6. XM_040653749.2 → XP_040509683.1  small conductance calcium-activated potassium channel protein 1 isoform X6

      Conserved Domains (1) summary
      cl03763
      Location:482 → 508
      CaMBD; Calmodulin binding domain

    7. XM_040653748.2 → XP_040509682.1  small conductance calcium-activated potassium channel protein 1 isoform X5

      Conserved Domains (1) summary
      cl03763
      Location:479 → 508
      CaMBD; Calmodulin binding domain

    8. XM_040653751.2 → XP_040509685.1  small conductance calcium-activated potassium channel protein 1 isoform X7

      Related
      ENSGALP00010042649.1, ENSGALT00010069207.1
      Conserved Domains (1) summary
      smart01053
      Location:362 → 440
      CaMBD; Calmodulin binding domain

    RNA

    1. XR_003072081.3 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052600.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      3357174..3368030
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040692833.2 → XP_040548767.1  small conductance calcium-activated potassium channel protein 1 isoform X7

      Conserved Domains (1) summary
      smart01053
      Location:362 → 440
      CaMBD; Calmodulin binding domain

    2. XM_040692828.2 → XP_040548762.1  small conductance calcium-activated potassium channel protein 1 isoform X8

      Conserved Domains (2) summary
      smart01053
      Location:532 → 610
      CaMBD; Calmodulin binding domain
      PRK12323
      Location:9 → 228
      PRK12323; DNA polymerase III subunit gamma/tau

    3. XM_040692830.2 → XP_040548764.1  small conductance calcium-activated potassium channel protein 1 isoform X10

      Conserved Domains (2) summary
      smart01053
      Location:532 → 607
      CaMBD; Calmodulin binding domain
      PRK12323
      Location:9 → 228
      PRK12323; DNA polymerase III subunit gamma/tau

    4. XM_040692829.2 → XP_040548763.1  small conductance calcium-activated potassium channel protein 1 isoform X9

      Conserved Domains (2) summary
      smart01053
      Location:529 → 607
      CaMBD; Calmodulin binding domain
      PRK12323
      Location:9 → 228
      PRK12323; DNA polymerase III subunit gamma/tau

    5. XM_040692831.1 → XP_040548765.1  small conductance calcium-activated potassium channel protein 1 isoform X11

      Conserved Domains (2) summary
      smart01053
      Location:529 → 604
      CaMBD; Calmodulin binding domain
      PRK12323
      Location:9 → 228
      PRK12323; DNA polymerase III subunit gamma/tau

    6. XM_040692832.2 → XP_040548766.1  small conductance calcium-activated potassium channel protein 1 isoform X7

      Conserved Domains (1) summary
      smart01053
      Location:362 → 440
      CaMBD; Calmodulin binding domain

    RNA

    1. XR_005856447.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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