SELP selectin P [Gallus gallus (chicken)] - Gene

Summary

Symbol: SELPprovided by CGNC
Full Name: selectin Pprovided by CGNC
Primary source: CGNC:1900
See related: Ensembl:ENSGALG00010012915
Gene type: protein coding
RefSeq status: MODEL
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
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Genomic context

Location:: chromosome: 8

Exon count:: 19

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	8	NC_052539.1 (3711529..3720219)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	8	NC_052580.1 (3722958..3731647)

Chromosome 8 - NC_052539.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Markers

SELEsts1 (e-PCR), detects polymorphism
- UniSTS:280355

Homology

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables oligosaccharide binding	IEA Inferred from Electronic Annotation more info	PubMed
enables sialic acid binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules	IEA Inferred from Electronic Annotation more info	PubMed
involved_in leukocyte tethering or rolling	IEA Inferred from Electronic Annotation more info	PubMed
involved_in response to cytokine	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in external side of plasma membrane	IEA Inferred from Electronic Annotation more info	PubMed
located_in extracellular space	IEA Inferred from Electronic Annotation more info	PubMed
located_in membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: P-selectin; E-selectin

Names: selectin P (granule membrane protein 140kDa, antigen CD62)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052539.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

3711529..3720219

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_040704792.2 → XP_040560726.1 P-selectin isoform X2

UniProtKB/TrEMBL

A0A8V0YHJ7

Conserved Domains (4) summary

cd00033
Location:254 → 311

CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system

cd03592
Location:96 → 214

CLECT_selectins_like; C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels)

PHA02927
Location:458 → 682

PHA02927; secreted complement-binding protein; Provisional

cd00054
Location:222 → 249

EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
XM_040704800.2 → XP_040560734.1 E-selectin isoform X8

UniProtKB/TrEMBL

A0A8V0YHK8

Conserved Domains (4) summary

cd00033
Location:254 → 311

CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system

cd03592
Location:96 → 214

CLECT_selectins_like; C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels)

PHA02927
Location:310 → 558

PHA02927; secreted complement-binding protein; Provisional

cd00054
Location:222 → 249

EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
XM_046944998.1 → XP_046800954.1 P-selectin isoform X7

UniProtKB/TrEMBL

A0A8V0YHJ7
XM_422207.8 → XP_422207.5 P-selectin isoform X1

UniProtKB/TrEMBL

A0A8V0YB73, A0A8V0YHJ7

Related

ENSGALP00010018022.1, ENSGALT00010031011.1

Conserved Domains (4) summary

cd00033
Location:198 → 255

CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system

cd03592
Location:40 → 158

CLECT_selectins_like; C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels)

PHA02927
Location:402 → 626

PHA02927; secreted complement-binding protein; Provisional

cd00054
Location:166 → 193

EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
XM_040704794.2 → XP_040560728.2 P-selectin isoform X5

UniProtKB/TrEMBL

A0A8V0YHJ7
XM_040704795.2 → XP_040560729.2 P-selectin isoform X6

UniProtKB/TrEMBL

A0A8V0YHJ7
XM_004943140.5 → XP_004943197.2 P-selectin isoform X4

UniProtKB/TrEMBL

A0A8V0YHJ7

Conserved Domains (4) summary

cd00033
Location:186 → 243

CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system

cd03592
Location:28 → 146

CLECT_selectins_like; C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels)

PHA02927
Location:390 → 614

PHA02927; secreted complement-binding protein; Provisional

cd00054
Location:154 → 181

EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
XM_040704797.2 → XP_040560731.1 P-selectin isoform X7

UniProtKB/TrEMBL

A0A8V0YHJ7

Conserved Domains (4) summary

cd00033
Location:164 → 221

CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system

cd03592
Location:6 → 124

CLECT_selectins_like; C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels)

PHA02927
Location:368 → 592

PHA02927; secreted complement-binding protein; Provisional

cd00054
Location:132 → 159

EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
XM_040704796.2 → XP_040560730.1 P-selectin isoform X7

UniProtKB/TrEMBL

A0A8V0YHJ7

Conserved Domains (4) summary

cd00033
Location:164 → 221

CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system

cd03592
Location:6 → 124

CLECT_selectins_like; C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels)

PHA02927
Location:368 → 592

PHA02927; secreted complement-binding protein; Provisional

cd00054
Location:132 → 159

EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
XM_046945000.1 → XP_046800956.1 P-selectin isoform X7

UniProtKB/TrEMBL

A0A8V0YHJ7
XM_040704793.2 → XP_040560727.1 P-selectin isoform X3

UniProtKB/TrEMBL

A0A8V0YB58, A0A8V0YHJ7

Related

ENSGALP00010018007.1, ENSGALT00010030988.1

Conserved Domains (4) summary

cd00033
Location:190 → 247

CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system

cd03592
Location:32 → 150

CLECT_selectins_like; C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels)

PHA02927
Location:394 → 618

PHA02927; secreted complement-binding protein; Provisional

cd00054
Location:158 → 185

EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
XM_046944999.1 → XP_046800955.1 P-selectin isoform X7

UniProtKB/TrEMBL

A0A8V0YHJ7
XM_040704798.2 → XP_040560732.1 P-selectin isoform X7

UniProtKB/TrEMBL

A0A8V0YHJ7

Conserved Domains (4) summary

cd00033
Location:164 → 221

CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system

cd03592
Location:6 → 124

CLECT_selectins_like; C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels)

PHA02927
Location:368 → 592

PHA02927; secreted complement-binding protein; Provisional

cd00054
Location:132 → 159

EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

NC_052580.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Range

3722958..3731647

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_040677265.2 → XP_040533199.1 P-selectin isoform X1

UniProtKB/TrEMBL

A0A8V0YB73, A0A8V0YHJ7

Conserved Domains (4) summary

cd00033
Location:198 → 255

CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system

cd03592
Location:40 → 158

CLECT_selectins_like; C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels)

PHA02927
Location:402 → 626

PHA02927; secreted complement-binding protein; Provisional

cd00054
Location:166 → 193

EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...