ERCC4 ERCC excision repair 4, endonuclease catalytic subunit [Gallus gallus (chicken)] - Gene

Summary

Symbol: ERCC4provided by CGNC
Full Name: ERCC excision repair 4, endonuclease catalytic subunitprovided by CGNC
Primary source: CGNC:2155
See related: Ensembl:ENSGALG00010020422
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as: XPF
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 14

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	14	NC_052545.1 (679496..692334)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	14	NC_052586.1 (678281..691119)

Chromosome 14 - NC_052545.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables damaged DNA binding	IEA Inferred from Electronic Annotation more info	PubMed
enables single-stranded DNA binding	IEA Inferred from Electronic Annotation more info	PubMed
enables single-stranded DNA endodeoxyribonuclease activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in double-strand break repair via homologous recombination	IEA Inferred from Electronic Annotation more info	PubMed
involved_in nucleotide-excision repair involved in interstrand cross-link repair	IEA Inferred from Electronic Annotation more info	PubMed
involved_in resolution of meiotic recombination intermediates	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of nucleotide-excision repair factor 1 complex	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: DNA repair endonuclease XPF

Names: excision repair cross-complementation group 4; excision repair cross-complementing rodent repair deficiency, complementation group 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001318411.2 → NP_001305340.2 DNA repair endonuclease XPF

Status: PROVISIONAL

Source sequence(s)

JAENSK010000257

UniProtKB/TrEMBL

A0A8V0ZKQ1, V5Y0M7

Related

ENSGALP00010029190.1, ENSGALT00010049381.1

Conserved Domains (1) summary

TIGR00596
Location:86 → 894

rad1; DNA repair protein (rad1)

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052545.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

679496..692334

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_025155056.2 → XP_025010824.2 DNA repair endonuclease XPF isoform X1

UniProtKB/TrEMBL

V5Y0M7

Conserved Domains (1) summary

TIGR00596
Location:1 → 724

rad1; DNA repair protein (rad1)