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    MTMR9LP myotubularin related protein 9 like pseudogene [ Gallus gallus (chicken) ]

    Gene ID: 419652, updated on 3-Dec-2024

    Summary

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    Official Symbol
    MTMR9LPprovided by CGNC
    Official Full Name
    myotubularin related protein 9 like pseudogeneprovided by CGNC
    Primary source
    CGNC:51051
    See related
    Ensembl:ENSGALG00010017454
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
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    Genomic context

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    See MTMR9LP in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 23 NC_052554.1 (5506276..5513932)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 23 NC_052595.1 (5269668..5277321)

    Chromosome 23 - NC_052554.1Genomic Context describing neighboring genes Neighboring gene MARCKS like 1 Neighboring gene histone deacetylase 1 Neighboring gene LCK proto-oncogene, Src family tyrosine kinase Neighboring gene family with sequence similarity 167 member B Neighboring gene eukaryotic translation initiation factor 3 subunit I Neighboring gene transmembrane protein 234 Neighboring gene doublecortin domain containing 2B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in negative regulation of autophagy IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    myotubularin-related protein 9-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052554.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      5506276..5513932
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015297848.4 → XP_015153334.2  myotubularin-related protein 9-like isoform X1

      UniProtKB/TrEMBL
      A0A8V0Z2K2
      Conserved Domains (2) summary
      cd14536
      Location:260 → 483
      PTP-MTMR9; protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 9
      cl17171
      Location:1 → 174
      PH-like; Pleckstrin homology-like domain

    2. XM_025143065.3 → XP_024998833.1  myotubularin-related protein 9-like isoform X2

      UniProtKB/TrEMBL
      A0A8V0Z2K2
      Related
      ENSGALP00010024685.1, ENSGALT00010042146.1
      Conserved Domains (2) summary
      cd13211
      Location:1 → 122
      PH-GRAM_MTMR9; Myotubularian (MTM) related 9 protein (MTMR9) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      pfam06602
      Location:153 → 471
      Myotub-related; Myotubularin-like phosphatase domain

    3. XM_417799.8 → XP_417799.2  myotubularin-related protein 9-like isoform X3

      UniProtKB/TrEMBL
      A0A8V0Z2K2, E1C6W8
      Related
      ENSGALP00010024678.1, ENSGALT00010042138.1
      Conserved Domains (2) summary
      cd13211
      Location:1 → 102
      PH-GRAM_MTMR9; Myotubularian (MTM) related 9 protein (MTMR9) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      pfam06602
      Location:126 → 451
      Myotub-related; Myotubularin-like phosphatase domain

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052595.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      5269668..5277321
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046932073.1 → XP_046788029.1  myotubularin-related protein 9-like isoform X1

      UniProtKB/TrEMBL
      A0A8V0Z2K2

    2. XM_046932074.1 → XP_046788030.1  myotubularin-related protein 9-like isoform X2

      UniProtKB/TrEMBL
      A0A8V0Z2K2

    3. XM_040689842.2 → XP_040545776.1  myotubularin-related protein 9-like isoform X3

      UniProtKB/TrEMBL
      A0A8V0Z2K2, E1C6W8
      Conserved Domains (2) summary
      cd13211
      Location:1 → 102
      PH-GRAM_MTMR9; Myotubularian (MTM) related 9 protein (MTMR9) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      pfam06602
      Location:126 → 451
      Myotub-related; Myotubularin-like phosphatase domain
    Nucleotide Protein
    Heading Accession and Version

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