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    SETD7 SET domain containing lysine methyltransferase 7 [ Gallus gallus (chicken) ]

    Gene ID: 422443, updated on 17-Aug-2024

    Summary

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    Symbol
    SETD7provided by CGNC
    Full Name
    SET domain containing lysine methyltransferase 7provided by CGNC
    Primary source
    CGNC:7445
    See related
    Ensembl:ENSGALG00010009114
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See SETD7 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (28913985..28930845, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (28866104..28883098, complement)

    Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124417912 Neighboring gene uncharacterized LOC121110786 Neighboring gene RAB33B, member RAS oncogene family Neighboring gene uncharacterized LOC422442 Neighboring gene microsomal glutathione S-transferase 2 Neighboring gene mastermind like transcriptional coactivator 3 Neighboring gene uncharacterized LOC121110766

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Recruitment of histone modifications by USF proteins at a vertebrate barrier element. West AG, et al. Mol Cell, 2004 Nov 5. PMID 15525517
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone H3K4 monomethyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chromosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    histone-lysine N-methyltransferase SETD7
    Names
    SET domain-containing protein 7
    XP_040527601.1
    XP_420409.3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      28913985..28930845 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_420409.8 → XP_420409.3  histone-lysine N-methyltransferase SETD7

      UniProtKB/TrEMBL
      A0A8V0Y4K0
      Related
      ENSGALP00010012427.1, ENSGALT00010021744.1
      Conserved Domains (2) summary
      COG2849
      Location:37 → 134
      YwqK; Antitoxin component YwqK of the YwqJK toxin-antitoxin module [Defense mechanisms]
      cd10530
      Location:208 → 337
      SET_SETD7; SET domain found in SET domain-containing protein 7 (SETD7) and similar proteins

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      28866104..28883098 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040671667.2 → XP_040527601.1  histone-lysine N-methyltransferase SETD7

      UniProtKB/TrEMBL
      A0A8V0Y4K0
      Conserved Domains (2) summary
      COG2849
      Location:37 → 134
      YwqK; Antitoxin component YwqK of the YwqJK toxin-antitoxin module [Defense mechanisms]
      cd10530
      Location:208 → 337
      SET_SETD7; SET domain found in SET domain-containing protein 7 (SETD7) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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